CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gww1.5.1.126.1
(
Pichia stipitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
e_gww1.5.1.126.1
T389550_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LEU3
M01590_2.00
Saccharomyces cerevisiae
NNCGGNNNN
NNNNCCGNN
PBM
Zhu et al.(2009)
Leu3
0.552
0.650
LEU3
M07526_2.00
Saccharomyces cerevisiae
CCKDHDSCGS
SCGSHDHMGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0324.1
0.552
0.650
LEU3
M08684_2.00
Saccharomyces cerevisiae
SCKNNNNMGS
SCKNNNNMGS
Misc
DeBoer et al.(2011)
YLR451W_781
0.552
0.650
LEU3
M11482_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$LEU3_B
0.552
0.650
LEU3
M11483_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$LEU3_Q6
0.552
0.650
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gww1.5.1.126.1
Zinc cluster
48
90
IACVECRQQKSRCDAHEKHPGPCTRCIKKGLKCDLKSDYKRTY
Links
Other
Zinc cluster
family TFs
Other
Pichia stipitis
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy