CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tah-2
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU02214
T390576_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
tah-2
M02593_2.00
Neurospora crassa
CGGRDNNN
NNNHYCCG
PBM
Weirauch et al.(2014)
pTH9012
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02593_2.00
Zinc cluster
27
66
NACDVCKRRKVKCNGATPCGYCVSRKHPSLCLYSPPRQRR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU02214
Zinc cluster
37
76
NACDVCKRRKVKCNGATPCGYCVSRKHPSLCLYSPPRQRR
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_131430
Neurospora tetrasperma
NEUTE1DRAFT_131430
I
0.683
estExt_Genewise1Plus.C_90494
Neurospora discreta
estExt_Genewise1Plus.C_90494
I
0.666
SMAC_03654
Sordaria macrospora
SMAC_03654
I
0.617
TRIVIDRAFT_30358
Trichoderma virens
TRIVIDRAFT_30358
I
0.544