CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ff-7
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU04001
T390595_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ff-7
M02603_2.00
Neurospora crassa
VGCGSNN
NNSCGCB
PBM
Weirauch et al.(2014)
pTH8817
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02603_2.00
Zinc cluster
52
90
TGCLTCRRRKKKCDETKPQCTNCIKGSFQCAGYPPQRGN
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU04001
Zinc cluster
262
300
TGCLTCRRRKKKCDETKPQCTNCIKGSFQCAGYPPQRGN
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_49802
Neurospora tetrasperma
NEUTE1DRAFT_49802
I
0.683
SMAC_06177
Sordaria macrospora
SMAC_06177
I
0.683
scaffold_6-snap.550.1
Neurospora discreta
scaffold_6-snap.550.1
I
0.683
GGTG_06963
Gaeumannomyces graminis
GGTG_06963
I
0.582
CCM_00925
Cordyceps militaris
CCM_00925
I
0.582
BBA_08203
Beauveria bassiana
BBA_08203
I
0.582
CaO19.8813
Candida albicans
CaO19.8813
I
0.574
estExt_fgenesh1_pg.C_60724
Cryphonectria parasitica
estExt_fgenesh1_pg.C_60724
I
0.574
CaO19.1227
Candida albicans
CaO19.1227
I
0.574
CD36_07140
Candida dubliniensis
CD36_07140
I
0.569
PFL1_05822
Pseudozyma flocculosa
PFL1_05822
I
0.569
PODANS_4_2530
Podospora anserina
PODANS_4_2530
I
0.564
S40285_01325
Stachybotrys chlorohalonata
S40285_01325
I
0.564
VHEMI00428
Torrubiella hemipterigena
VHEMI00428
I
0.564
TRIATDRAFT_243083
Trichoderma atroviride
TRIATDRAFT_243083
I
0.564
TRIVIDRAFT_114462
Trichoderma virens
TRIVIDRAFT_114462
I
0.564
MGG_08093
Magnaporthe oryzae
MGG_08093
I
0.564
PV07_00139
Cladophialophora immunda
PV07_00139
I
0.563
X797_010800
Metarhizium robertsii
X797_010800
I
0.562
UV8b_8229
Ustilaginoidea virens
UV8b_8229
I
0.562
MGU_05613
Metarhizium guizhouense
MGU_05613
I
0.562
MAJ_05190
Metarhizium majus
MAJ_05190
I
0.562
MAC_03890
Metarhizium acridum
MAC_03890
I
0.562
MAM_05054
Metarhizium album
MAM_05054
I
0.562
MANI_012280
Metarhizium anisopliae
MANI_012280
I
0.562
MBR_04325
Metarhizium brunneum
MBR_04325
I
0.562
PFICI_06028
Pestalotiopsis fici
PFICI_06028
I
0.559
CTHT_0045110
Chaetomium thermophilum
CTHT_0045110
I
0.557
CHGG_08641
Chaetomium globosum
CHGG_08641
I
0.557
MYCTH_2307450
Myceliophthora thermophila
MYCTH_2307450
I
0.557
ACLA_003790
Aspergillus clavatus
CADACLAG00000098
I
0.553
PV10_02783
Exophiala mesophila
PV10_02783
I
0.553
VDBG_04249
Verticillium alfalfae
VDBG_04249
I
0.548
VDBG_04249
Verticillium albo atrum
VDBG_04249
I
0.548
VDAG_01478
Verticillium dahliae
VDAG_01478
I
0.548
Z517_01830
Fonsecaea pedrosoi
Z517_01830
I
0.546
PV11_06966
Exophiala sideris
PV11_06966
I
0.545
BBA_09836
Beauveria bassiana
BBA_09836
I
0.544
SAKL0D14916g
Lachancea kluyveri
SAKL0D14916g
I
0.543
FVEG_02704
Fusarium verticillioides
FVEG_02704
I
0.540
FPSE_00487
Fusarium pseudograminearum
FPSE_00487
I
0.540
FGRRES_10069
Fusarium graminearum
FGRRES_10069
I
0.540
FFUJ_07470
Fusarium fujikuroi
FFUJ_07470
I
0.540