12840_YKL222C (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 12840_YKL222C T390748_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YKL222C
M00093_2.00 		Saccharomyces cerevisiae
NNMVCGGARWN
NWYTCCGBKNN		 PBM
Badis et al.(2008)
YKL222C_2044 		0.546 0.718
YKL222C
M01586_2.00 		Saccharomyces cerevisiae
NVCGGVNNN
NNNBCCGBN		 PBM
Zhu et al.(2009)
Ykl222c 		0.546 0.718
YKL222C
M07519_2.00 		Saccharomyces cerevisiae
NACGGARWT
AWYTCCGTN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0428.1 		0.546 0.718
YKL222C
M08674_2.00 		Saccharomyces cerevisiae
NNNNBVVCGGARATWRNNBNN
NNVNNYWATYTCCGBBVNNNN		 Misc
DeBoer et al.(2011)
YKL222C_806 		0.546 0.718
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
12840_YKL222C Zinc cluster 22 62

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

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2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action