4509_YDR207C (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 4509_YDR207C T390852_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
UME6
M00081_2.00
Saccharomyces cerevisiae
NDHCDHGDHN

NDHCDHGDHN
PBM
Badis et al.(2008)
UME6_2040
0.683 1.000
UME6
M01575_2.00
Saccharomyces cerevisiae
VGCGSNWNN

NNWNSCGCB
PBM
Zhu et al.(2009)
Ume6
0.683 1.000
UME6
M08653_2.00
Saccharomyces cerevisiae
NSGCGGYWV

BWRCCGCSN
Misc
DeBoer et al.(2011)
YDR207C_511
0.683 1.000
UME6
M08468_2.00
Saccharomyces cerevisiae
TSGGCGGCTAWWT

AWWTAGCCGCCSA
COMPILED
Mathelier et al.(2014)
MA0412.1
0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
4509_YDR207C Zinc cluster 772 809

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

Invalid Input OrderBy

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action