GLYMA01G39540 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA01G39540 T001722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-9
M06633_2.00 		Arabidopsis thaliana
NNNNNNNDBCACCGACMHH
DDKGTCGGTGVHNNNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR5_col_a 		0.803 0.960
RAP2-9
M06634_2.00 		Arabidopsis thaliana
NCACCGACMHH
DDKGTCGGTGN		 Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a 		0.803 0.960
ERF010
M06690_2.00 		Arabidopsis thaliana
HHNHHDYCACCGHCD
HGDCGGTGRHDDNDD		 Dap-seq
OMalley et al.(2016)
DEAR2_col_a 		0.783 0.940
ERF010
M06691_2.00 		Arabidopsis thaliana
NNNHDBCACCGACAH
DTGTCGGTGVHDNNN		 Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a 		0.783 0.940
RAP2-10
M00850_2.00 		Arabidopsis thaliana
NNRCCGHCNN
NNGDCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DEAR4 		0.782 0.940
ERF011
M06628_2.00 		Arabidopsis thaliana
YHNHHDYCACCGHCN
NGDCGGTGRHDDNDR		 Dap-seq
OMalley et al.(2016)
CEJ1_col_a 		0.781 0.900
ERF011
M06629_2.00 		Arabidopsis thaliana
NDNCACCGACMHH
DDKGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a 		0.781 0.900
ERF008
M00844_2.00 		Arabidopsis thaliana
SHRCCGHC
GDCGGYDS		 PBM
Franco-Zorrilla et al.(2014)
DEAR3 		0.772 0.920
ERF008
M01048_2.00 		Arabidopsis thaliana
CRCCGMCN
NGKCGGYG		 PBM
Sullivan et al.(2014)
pTH7672 		0.772 0.920
ERF008
M06602_2.00 		Arabidopsis thaliana
NNNNNBCACCGACAHHN
NDDTGTCGGTGVNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR3_col_a 		0.772 0.920
ERF008
M06603_2.00 		Arabidopsis thaliana
NNBCACCGACAWH
DWTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a 		0.772 0.920
RAP2-1
M06582_2.00 		Arabidopsis thaliana
NHDYCRCCGMCAH
DTGKCGGYGRHDN		 Dap-seq
OMalley et al.(2016)
RAP21_col_a 		0.720 0.840
RAP2-1
M06583_2.00 		Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN
NNNNNHDDTGTCGGTGVHDN		 Dap-seq
OMalley et al.(2016)
RAP21_colamp_a 		0.720 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA01G39540.1 AP2 26 77

Links

Other AP2 family TFs
Other Glycine max TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28718.m000038 Ricinus communis 28718.m000038 I 0.793
30170.m013843 Ricinus communis 30170.m013843 I 0.784
AMTR_s00051p00204250 Amborella trichopoda AMTR_s00051p00204250 I 0.715
Aquca_007_00717 Aquilegia coerulea Aquca_007_00717 I 0.786
Aquca_010_00625 Aquilegia coerulea Aquca_010_00625 I 0.784
RAP2-1 Arabidopsis thaliana AT1G46768 D 0.720
ERF008 Arabidopsis thaliana AT2G23340 D 0.772
ERF011 Arabidopsis thaliana AT3G50260 D 0.781
RAP2-9 Arabidopsis thaliana AT4G06746 D 0.803
RAP2-10 Arabidopsis thaliana AT4G36900 D 0.782
ERF010 Arabidopsis thaliana AT5G67190 D 0.783
BGIOSGA014220 Oryza indica BGIOSGA014220 I 0.766
BGIOSGA014221 Oryza indica BGIOSGA014221 I 0.766
BGIOSGA022380 Oryza indica BGIOSGA022380 I 0.782
Bo1g004940 Brassica oleracea Bo1g004940 I 0.772
Bo4g151460 Brassica oleracea Bo4g151460 I 0.782
Bo7g063980 Brassica oleracea Bo7g063980 I 0.783
Bo7g118430 Brassica oleracea Bo7g118430 I 0.782
Bo8g079660 Brassica oleracea Bo8g079660 I 0.783
Bo9g020380 Brassica oleracea Bo9g020380 I 0.777
Bostr.0568s0141 Boechera stricta Bostr.0568s0141 I 0.783
Bostr.12302s0138 Boechera stricta Bostr.12302s0138 I 0.765
Bostr.27895s0153 Boechera stricta Bostr.27895s0153 I 0.782
Bostr.3877s0058 Boechera stricta Bostr.3877s0058 I 0.766
Bostr.6864s0220 Boechera stricta Bostr.6864s0220 I 0.773
Bostr.7867s1581 Boechera stricta Bostr.7867s1581 I 0.782
Bra011744 Brassica rapa Bra011744 I 0.781
Bra012140 Brassica rapa Bra012140 I 0.762
Bra014056 Brassica rapa Bra014056 I 0.776
Bra017811 Brassica rapa Bra017811 I 0.782
Bra032173 Brassica rapa Bra032173 I 0.782
Bra036061 Brassica rapa Bra036061 I 0.783
Bra037124 Brassica rapa Bra037124 I 0.777
BRADI1G48320 Brachypodium distachyon BRADI1G48320 I 0.782
BRADI5G24110 Brachypodium distachyon BRADI5G24110 I 0.766
Cagra.0342s0005 Capsella grandiflora Cagra.0342s0005 I 0.783
Cagra.0706s0004 Capsella grandiflora Cagra.0706s0004 I 0.781
Cagra.1735s0005 Capsella grandiflora Cagra.1735s0005 I 0.765
Cagra.29993s0001 Capsella grandiflora Cagra.29993s0001 I 0.782
Cagra.4909s0050 Capsella grandiflora Cagra.4909s0050 I 0.782
Carubv10005767m.g Capsella rubella Carubv10005767m.g I 0.782
Carubv10010891m.g Capsella rubella Carubv10010891m.g I 0.765
Carubv10018162m.g Capsella rubella Carubv10018162m.g I 0.781
Carubv10024198m.g Capsella rubella Carubv10024198m.g I 0.782
Carubv10027999m.g Capsella rubella Carubv10027999m.g I 0.783
cassava17493.valid.m1 Manihot esculenta cassava17493.valid.m1 I 0.804
cassava47353.m1 Manihot esculenta cassava47353.m1 I 0.784
cassava9153.m1 Manihot esculenta cassava9153.m1 I 0.784
Ca_01556 Cicer arietinum Ca_01556 I 0.723
Ca_02170 Cicer arietinum Ca_02170 I 0.815
Ciclev10002733m.g Citrus clementina Ciclev10002733m.g I 0.782
Ciclev10026687m.g Citrus clementina Ciclev10026687m.g I 0.795
Cla014175 Citrullus lanatus Cla014175 I 0.780
Cla020550 Citrullus lanatus Cla020550 I 0.765
Cla020961 Citrullus lanatus Cla020961 I 0.776
Cla022937 Citrullus lanatus Cla022937 I 0.770
Cucsa.102560 Cucumis sativus Cucsa.102560 I 0.780
Cucsa.352470 Cucumis sativus Cucsa.352470 I 0.776
Cucsa.367300 Cucumis sativus Cucsa.367300 I 0.765
Cucsa.395960 Cucumis sativus Cucsa.395960 I 0.770
Eucgr.F00192 Eucalyptus grandis Eucgr.F00192 I 0.774
Eucgr.F02317 Eucalyptus grandis Eucgr.F02317 I 0.776
Eucgr.F02319 Eucalyptus grandis Eucgr.F02319 I 0.776
Eucgr.H02094 Eucalyptus grandis Eucgr.H02094 I 0.795
DEAR3 Arabidopsis lyrata fgenesh2_kg.4__264__AT2G23340.1 I 0.782
CEJ1 Arabidopsis lyrata fgenesh2_kg.5__1372__AT3G50260.1 I 0.781
RAP2.9 Arabidopsis lyrata fgenesh2_kg.6__2823__AT4G06746.1 I 0.803
gene09137-v1.0-hybrid Fragaria vesca gene09137-v1.0-hybrid I 0.770
gene23873-v1.0-hybrid Fragaria vesca gene23873-v1.0-hybrid I 0.794
GLYMA04G04355 Glycine max GLYMA04G04355 I 0.764
GLYMA05G19050 Glycine max GLYMA05G19050 I 0.814
GLYMA06G04490 Glycine max GLYMA06G04490 I 0.764
GLYMA11G05700 Glycine max GLYMA11G05700 I 0.817
GLYMA14G09320 Glycine max GLYMA14G09320 I 0.776
GLYMA17G18580 Glycine max GLYMA17G18580 I 0.802
GLYMA17G35860 Glycine max GLYMA17G35860 I 0.770
Gorai.003G026100 Gossypium raimondii Gorai.003G026100 I 0.795
Gorai.003G099700 Gossypium raimondii Gorai.003G099700 I 0.763
Gorai.008G077900 Gossypium raimondii Gorai.008G077900 I 0.795
Gorai.009G214300 Gossypium raimondii Gorai.009G214300 I 0.776
Gorai.010G021900 Gossypium raimondii Gorai.010G021900 I 0.763
GRMZM2G119865 Zea mays GRMZM2G119865 I 0.749
GRMZM2G174917 Zea mays GRMZM2G174917 I 0.766
GRMZM2G301860 Zea mays GRMZM2G301860 I 0.746
GRMZM2G421033 Zea mays GRMZM2G421033 I 0.766
GSMUA_Achr3G13190_001 Musa acuminata GSMUA_Achr3G13190_001 I 0.774
GSMUA_Achr4G20280_001 Musa acuminata GSMUA_Achr4G20280_001 I 0.756
GSMUA_Achr5G22190_001 Musa acuminata GSMUA_Achr5G22190_001 I 0.750
GSMUA_Achr7G05410_001 Musa acuminata GSMUA_Achr7G05410_001 I 0.749
GSMUA_Achr7G20800_001 Musa acuminata GSMUA_Achr7G20800_001 I 0.743
GSMUA_Achr8G15640_001 Musa acuminata GSMUA_Achr8G15640_001 I 0.740
GSMUA_Achr9G11310_001 Musa acuminata GSMUA_Achr9G11310_001 I 0.752
GSMUA_AchrUn_randomG12040_001 Musa acuminata GSMUA_AchrUn_randomG12040_001 I 0.768
GSMUA_AchrUn_randomG26940_001 Musa acuminata GSMUA_AchrUn_randomG26940_001 I 0.763
LjSGA_004289.2 Lotus japonicus LjSGA_004289.2 I 0.817
LjSGA_007705.1 Lotus japonicus LjSGA_007705.1 I 0.725
LjSGA_134387.1 Lotus japonicus LjSGA_134387.1 I 0.754
LPERR04G23120 Leersia perrieri LPERR04G23120 I 0.766
LPERR06G04000 Leersia perrieri LPERR06G04000 I 0.782
Lus10009373.g Linum usitatissimum Lus10009373.g I 0.776
Lus10010043.g Linum usitatissimum Lus10010043.g I 0.786
Lus10018727.g Linum usitatissimum Lus10018727.g I 0.784
MDP0000125673 Malus domestica MDP0000125673 I 0.794
MDP0000179962 Malus domestica MDP0000179962 I 0.794
MDP0000756341 Malus domestica MDP0000756341 I 0.779
mgf000289m Mimulus guttatus mgf000289m I 0.771
mgf006561m Mimulus guttatus mgf006561m I 0.778
mgf021115m Mimulus guttatus mgf021115m I 0.784
mgf025363m Mimulus guttatus mgf025363m I 0.759
MLOC_81350 Hordeum vulgare MLOC_81350 I 0.765
MTR_1g019110 Medicago truncatula MTR_1g019110 I 0.764
MTR_3g102100 Medicago truncatula MTR_3g102100 I 0.723
MTR_5g016750 Medicago truncatula MTR_5g016750 I 0.815
OBART06G04460 Oryza barthii OBART06G04460 I 0.782
OGLUM04G27370 Oryza glumaepatula OGLUM04G27370 I 0.766
OGLUM06G04560 Oryza glumaepatula OGLUM06G04560 I 0.782
OMERI04G22870 Oryza meridionalis OMERI04G22870 I 0.766
ONIVA04G25910 Oryza nivara ONIVA04G25910 I 0.766
ONIVA06G05630 Oryza nivara ONIVA06G05630 I 0.782
OPUNC06G04240 Oryza punctata OPUNC06G04240 I 0.782
orange1.1g031669m.g Citrus sinensis orange1.1g031669m.g I 0.795
orange1.1g041516m.g Citrus sinensis orange1.1g041516m.g I 0.782
ORGLA04G0237600 Oryza glaberrima ORGLA04G0237600 I 0.766
ORGLA06G0041000 Oryza glaberrima ORGLA06G0041000 I 0.782
ORUFI06G04420 Oryza rufipogon ORUFI06G04420 I 0.782
OS04G0648900 Oryza sativa OS04G0648900 I 0.766
OS06G0166400 Oryza sativa OS06G0166400 I 0.782
Pavir.J04844 Panicum virgatum Pavir.J04844 I 0.766
Pavir.J20437 Panicum virgatum Pavir.J20437 I 0.782
Pavir.J27349 Panicum virgatum Pavir.J27349 I 0.766
Pavir.J34361 Panicum virgatum Pavir.J34361 I 0.782
PGSC0003DMG400004005 Solanum tuberosum PGSC0003DMG400004005 I 0.785
PGSC0003DMG400007951 Solanum tuberosum PGSC0003DMG400007951 I 0.771
PGSC0003DMG400034101 Solanum tuberosum PGSC0003DMG400034101 I 0.778
PK15612.1 Cannabis sativa PK15612.1 I 0.767
POPTR_0002s12550 Populus trichocarpa POPTR_0002s12550 I 0.784
POPTR_0005s18430 Populus trichocarpa POPTR_0005s18430 I 0.804
POPTR_0007s10750 Populus trichocarpa POPTR_0007s10750 I 0.804
POPTR_0014s02530 Populus trichocarpa POPTR_0014s02530 I 0.784
PRUPE_ppa012302mg Prunus persica PRUPE_ppa012302mg I 0.785
PRUPE_ppa012516mg Prunus persica PRUPE_ppa012516mg I 0.792
SapurV1A.0167s0190 Salix purpurea SapurV1A.0167s0190 I 0.786
SapurV1A.0423s0180 Salix purpurea SapurV1A.0423s0180 I 0.784
SapurV1A.0689s0100 Salix purpurea SapurV1A.0689s0100 I 0.804
SapurV1A.1340s0030 Salix purpurea SapurV1A.1340s0030 I 0.790
SapurV1A.1616s0040 Salix purpurea SapurV1A.1616s0040 I 0.790
SapurV1A.2355s0030 Salix purpurea SapurV1A.2355s0030 I 0.784
Sb06g030660 Sorghum bicolor Sb06g030660 I 0.766
Sb10g004580 Sorghum bicolor Sb10g004580 I 0.782
RAP2.1 Arabidopsis lyrata scaffold_104275.1 I 0.722
RAP2.10 Arabidopsis lyrata scaffold_700370.1 I 0.782
DEAR2 Arabidopsis lyrata scaffold_803390.1 I 0.783
Solyc04g078640.1 Solanum lycopersicum Solyc04g078640.1 I 0.771
TCM_000669 Theobroma cacao TCM_000669 I 0.795
TCM_033791 Theobroma cacao TCM_033791 I 0.774
Thhalv10000354m.g Eutrema salsugineum Thhalv10000354m.g I 0.739
Thhalv10004985m.g Eutrema salsugineum Thhalv10004985m.g I 0.783
Thhalv10026288m.g Eutrema salsugineum Thhalv10026288m.g I 0.782
Thhalv10029052m.g Eutrema salsugineum Thhalv10029052m.g I 0.796
Traes_2BL_1E57B73B21 Triticum aestivum Traes_2BL_1E57B73B21 I 0.765
VIT_07s0031g00190 Vitis vinifera VIT_07s0031g00190 I 0.803
VIT_18s0001g10150 Vitis vinifera VIT_18s0001g10150 I 0.742