OGLUM09G21140 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM09G21140 T003316_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.867 0.846
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.842 0.846
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.777 0.769
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.777 0.769
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.774 0.712
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.774 0.712
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.774 0.712
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.761 0.654
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.761 0.654
ERF1B
M01619_2.00 		Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN		 PBM
Weirauch et al.(2014)
pTH8795 		0.742 0.712
ERF1B
M06626_2.00 		Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF1_col_a 		0.742 0.712
ERF1B
M06627_2.00 		Arabidopsis thaliana
MGCCGCCD
HGGCGGCK		 Dap-seq
OMalley et al.(2016)
ERF1_colamp_a 		0.742 0.712
ERF1B
M09703_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2_01 		0.742 0.712
ERF1B
M09704_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2 		0.742 0.712
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.741 0.731
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.731 0.712
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.731 0.712
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.731 0.712
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.730 0.731
Q84J59_MAIZE
M09717_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BD1_01 		0.730 0.654
LEP
M06661_2.00 		Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH
DDNDRHDDHDRCGGCGGMGVN		 Dap-seq
OMalley et al.(2016)
LEP_col_a 		0.729 0.673
Q2TN80_WHEAT
M09715_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_02 		0.728 0.654
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.724 0.712
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.724 0.673
ERF086
M06663_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYHD
HDRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
PUCHI_col_a 		0.722 0.654
ERF086
M06664_2.00 		Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN
NNNDHDDHDRCGGCGGMGDHDNNNN		 Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a 		0.722 0.654
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.719 0.692
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.713 0.692
HRE1
M06595_2.00 		Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHKVNDN		 Dap-seq
OMalley et al.(2016)
ERF73_col_a 		0.711 0.673
HRE1
M06596_2.00 		Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY
RYGGCGGCGGHGRNDKHDRND		 Dap-seq
OMalley et al.(2016)
ERF73_colamp_a 		0.711 0.673
ERF091
M06638_2.00 		Arabidopsis thaliana
NNHNYHDCCGCCGCCRY
RYGGCGGCGGHDRNDNN		 Dap-seq
OMalley et al.(2016)
AT4G18450_col_a 		0.710 0.712
Q5Y836_TOBAC
M09732_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF5_02 		0.708 0.692
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.706 0.673
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.706 0.673
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.706 0.673
RAP2-3
M01050_2.00 		Arabidopsis thaliana
CGCCGCCR
YGGCGGCG		 PBM
Sullivan et al.(2014)
pTH8811 		0.706 0.673
RAP2-3
M00847_2.00 		Arabidopsis thaliana
NMGCCGCCDN
NHGGCGGCKN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.3 		0.706 0.673
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.704 0.654
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.701 0.692
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.701 0.692
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.701 0.692
O65242_TOBAC
M09730_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TSI1_01 		0.700 0.596
ERF15
M00718_2.00 		Arabidopsis thaliana
NGSCGSCB
VGSCGSCN		 PBM
Chang et al.(2013)
pTH7336 		0.699 0.654
ERF15
M06604_2.00 		Arabidopsis thaliana
NNNHNNHDBMGCCGCCDY
RHGGCGGCKVHDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF15_colamp_a 		0.699 0.654
ERF15
M06605_2.00 		Arabidopsis thaliana
NNYHDYMGCCGCCRY
RYGGCGGCKRHDRNN		 Dap-seq
OMalley et al.(2016)
ERF15_col 		0.699 0.654
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.698 0.692
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.693 0.654
ERF106
M01628_2.00 		Arabidopsis thaliana
NNNVCRVCN
NGBYGBNNN		 PBM
Weirauch et al.(2014)
pTH7426 		0.691 0.654
ERF087
M06573_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYYD
HRRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
AT1G28160_col_a 		0.691 0.673
ERF087
M06574_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYCR
YGRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
AT1G28160_colamp_a 		0.691 0.673
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.688 0.654
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.688 0.654
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.685 0.654
CRF2
M01622_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8680 		0.685 0.615
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.683 0.673
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.683 0.673
ERF10
M06562_2.00 		Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN
NRYGGCGGCGRHDDNDNNDNN		 Dap-seq
OMalley et al.(2016)
ERF10_col_a 		0.682 0.654
ERF10
M06563_2.00 		Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN
NNNNNNHDDYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF10_colamp_a 		0.682 0.654
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.681 0.692
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.681 0.692
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.679 0.654
ERF6
M01621_2.00 		Arabidopsis thaliana
NNGCCGGCVN
NBGCCGGCNN		 PBM
Weirauch et al.(2014)
pTH7228 		0.677 0.673
ERF6
M06637_2.00 		Arabidopsis thaliana
NHNHHDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHDDNDN		 Dap-seq
OMalley et al.(2016)
ERF6_col 		0.677 0.673
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM09G21140.1 AP2 18 70

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

2074 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29635.m000461 Ricinus communis 29635.m000461 I
29813.m001543 Ricinus communis 29813.m001543 I
30068.m002623 Ricinus communis 30068.m002623 I
30174.m008961 Ricinus communis 30174.m008961 I
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I
BGIOSGA031114 Oryza indica BGIOSGA031114 I
BGIOSGA037681 Oryza indica BGIOSGA037681 I
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I
cassava28630.m1 Manihot esculenta cassava28630.m1 I
cassava40212.m1 Manihot esculenta cassava40212.m1 I
cassava47343.m1 Manihot esculenta cassava47343.m1 N
cassava4942.m1 Manihot esculenta cassava4942.m1 I
cassava9303.m1 Manihot esculenta cassava9303.m1 I
Ca_00417 Cicer arietinum Ca_00417 I
Ca_10494 Cicer arietinum Ca_10494 I
Ca_16397 Cicer arietinum Ca_16397 I
Ca_25424 Cicer arietinum Ca_25424 I
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I
Ciclev10024614m.g Citrus clementina Ciclev10024614m.g N
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I
Cla005054 Citrullus lanatus Cla005054 N
Cla010474 Citrullus lanatus Cla010474 I
Cla021590 Citrullus lanatus Cla021590 I
Cucsa.158080 Cucumis sativus Cucsa.158080 I
Cucsa.193280 Cucumis sativus Cucsa.193280 N
Cucsa.258020 Cucumis sativus Cucsa.258020 I
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I
F775_02727 Aegilops tauschii F775_02727 I
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I
GLYMA03G01931 Glycine max GLYMA03G01931 I
GLYMA07G08542 Glycine max GLYMA07G08542 I
GLYMA13G05690 Glycine max GLYMA13G05690 I
GLYMA13G29920 Glycine max GLYMA13G29920 N
GLYMA15G09190 Glycine max GLYMA15G09190 N
GLYMA19G03120 Glycine max GLYMA19G03120 I
GLYMA19G03165 Glycine max GLYMA19G03165 I
GLYMA20G03890 Glycine max GLYMA20G03890 N
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I
GRMZM2G010100 Zea mays GRMZM2G010100 I
GRMZM2G018138 Zea mays GRMZM2G018138 I
GRMZM2G039112 Zea mays GRMZM2G039112 I
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N
LPERR09G12960 Leersia perrieri LPERR09G12960 I
LPERR12G14340 Leersia perrieri LPERR12G14340 I
Lus10008291.g Linum usitatissimum Lus10008291.g N
Lus10013764.g Linum usitatissimum Lus10013764.g I
Lus10036556.g Linum usitatissimum Lus10036556.g I
Lus10039171.g Linum usitatissimum Lus10039171.g I
Lus10041372.g Linum usitatissimum Lus10041372.g I
MDP0000127123 Malus domestica MDP0000127123 N
MDP0000133476 Malus domestica MDP0000133476 I
MDP0000138669 Malus domestica MDP0000138669 I
MDP0000276536 Malus domestica MDP0000276536 I
MDP0000316843 Malus domestica MDP0000316843 N
MDP0000551969 Malus domestica MDP0000551969 I
mgf018851m Mimulus guttatus mgf018851m I
mgf024137m Mimulus guttatus mgf024137m N
MLOC_18783 Hordeum vulgare MLOC_18783 I
MLOC_7255 Hordeum vulgare MLOC_7255 I
MTR_2g016730 Medicago truncatula MTR_2g016730 N
MTR_4g082345 Medicago truncatula MTR_4g082345 I
MTR_6g012970 Medicago truncatula MTR_6g012970 I
MTR_7g011630 Medicago truncatula MTR_7g011630 I
MTR_8g032610 Medicago truncatula MTR_8g032610 I
OBART12G17080 Oryza barthii OBART12G17080 I
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I
OMERI09G12500 Oryza meridionalis OMERI09G12500 I
OMERI11G15200 Oryza meridionalis OMERI11G15200 I
ONIVA09G17920 Oryza nivara ONIVA09G17920 I
ONIVA12G15550 Oryza nivara ONIVA12G15550 I
OPUNC09G15300 Oryza punctata OPUNC09G15300 I
OPUNC12G15550 Oryza punctata OPUNC12G15550 I
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I
OS12G0582900 Oryza sativa OS12G0582900 I
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I
Pavir.J28133 Panicum virgatum Pavir.J28133 I
Pavir.J28151 Panicum virgatum Pavir.J28151 I
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I
PK13330.1 Cannabis sativa PK13330.1 I
PK25269.1 Cannabis sativa PK25269.1 I
PK28640.1 Cannabis sativa PK28640.1 I
Pm008788 Prunus mume Pm008788 I
Pm015931 Prunus mume Pm015931 I
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I
Sb01g014810 Sorghum bicolor Sb01g014810 I
Sb02g030350 Sorghum bicolor Sb02g030350 I
Sb08g019530 Sorghum bicolor Sb08g019530 I
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I
Si024417m.g Setaria italica Si024417m.g I
Si032213m.g Setaria italica Si032213m.g I
Si038848m.g Setaria italica Si038848m.g I
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N
TCM_005425 Theobroma cacao TCM_005425 I
TCM_011632 Theobroma cacao TCM_011632 I
TCM_015579 Theobroma cacao TCM_015579 I
TCM_018659 Theobroma cacao TCM_018659 I
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I