CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA09G0133000
(
Oryza glaberrima
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
ORGLA09G0133000
T003952_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA09G0133000.1
AP2
31
88
PVYRGVRRRGGRPGAAGRWVCEVRVPGARGSRLWLGTFATAEAAARAHDAAALALRGR
Links
Other
AP2
family TFs
Other
Oryza glaberrima
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DREB1C
Oryza indica
BGIOSGA022219
N
0.683
DREB1H
Oryza indica
BGIOSGA029416
I
0.690
DREB1B
Oryza indica
BGIOSGA029417
N
0.760
BRADI4G35630
Brachypodium distachyon
BRADI4G35630
I
0.680
BRADI4G35650
Brachypodium distachyon
BRADI4G35650
I
0.686
GRMZM2G175856
Zea mays
GRMZM2G175856
N
0.703
GRMZM2G380377
Zea mays
GRMZM2G380377
N
0.683
LPERR06G01360
Leersia perrieri
LPERR06G01360
N
0.683
OBART09G16830
Oryza barthii
OBART09G16830
I
0.698
OGLUM09G17420
Oryza glumaepatula
OGLUM09G17420
I
0.690
OMERI06G01670
Oryza meridionalis
OMERI06G01670
N
0.683
OMERI09G12480
Oryza meridionalis
OMERI09G12480
I
0.697
ONIVA06G01850
Oryza nivara
ONIVA06G01850
N
0.683
ONIVA09G17880
Oryza nivara
ONIVA09G17880
N
0.760
ONIVA09G17890
Oryza nivara
ONIVA09G17890
I
0.690
OPUNC09G15280
Oryza punctata
OPUNC09G15280
I
0.697
ORGLA09G0133100
Oryza glaberrima
ORGLA09G0133100
I
0.690
ORUFI06G01550
Oryza rufipogon
ORUFI06G01550
N
0.683
ORUFI09G18190
Oryza rufipogon
ORUFI09G18190
N
0.760
ORUFI09G18200
Oryza rufipogon
ORUFI09G18200
I
0.690
DREB1C
Oryza sativa
OS06G0127100
N
0.683
DREB1H
Oryza sativa
OS09G0522100
I
0.690
Pavir.Fa00114
Panicum virgatum
Pavir.Fa00114
N
0.697
Pavir.J32829
Panicum virgatum
Pavir.J32829
N
0.703
Pavir.J35991
Panicum virgatum
Pavir.J35991
N
0.683
Sb07g025210
Sorghum bicolor
Sb07g025210
N
0.702
Sb10g001620
Sorghum bicolor
Sb10g001620
N
0.683
Si007199m.g
Setaria italica
Si007199m.g
N
0.683
Traes_5BL_5299B6B33
Triticum aestivum
Traes_5BL_5299B6B33
N
0.682