PGSC0003DMG400004024 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400004024 T004348_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.807 0.840
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.792 0.800
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.744 0.740
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.740 0.760
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.740 0.760
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.740 0.760
ERF109
M00849_2.00 		Arabidopsis thaliana
NGCCGNHNN
NNDNCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RRTF1 		0.734 0.720
ERF109
M06653_2.00 		Arabidopsis thaliana
CKSCGCCGYHWHHNN
NNDDWDRCGGCGSMG		 Dap-seq
OMalley et al.(2016)
RRTF1_col_a 		0.734 0.720
ERF109
M06654_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN
NNNDAWDRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a 		0.734 0.720
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.729 0.700
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.704 0.680
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.704 0.680
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.694 0.660
ERF2
M01631_2.00 		Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN		 PBM
Weirauch et al.(2014)
pTH8113 		0.693 0.680
ERF2
M06672_2.00 		Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD		 Dap-seq
OMalley et al.(2016)
ERF2_col_a 		0.693 0.680
ERF2
M06673_2.00 		Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN		 Dap-seq
OMalley et al.(2016)
ERF2_colamp_a 		0.693 0.680
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.690 0.780
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.690 0.780
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.690 0.780
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.690 0.780
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.685 0.660
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.685 0.660
CRF4
M01626_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8261 		0.684 0.680
CRF4
M06645_2.00 		Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN
NRGHDDHDGYGGCGGCGGHKV		 Dap-seq
OMalley et al.(2016)
CRF4_col_a 		0.684 0.680
CRF4
M06646_2.00 		Arabidopsis thaliana
YCDYCGCCGCCGYYD
HRRCGGCGGCGRHGR		 Dap-seq
OMalley et al.(2016)
CRF4_colamp_a 		0.684 0.680
CRF2
M01622_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8680 		0.682 0.720
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.681 0.700
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.681 0.700
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400010296 AP2 66 117

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

704 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WRKY38 Arabidopsis thaliana AT5G22570 D
BGIOSGA004705 Oryza indica BGIOSGA004705 I
BGIOSGA012523 Oryza indica BGIOSGA012523 N
BGIOSGA012525 Oryza indica BGIOSGA012525 N
BGIOSGA017556 Oryza indica BGIOSGA017556 I
BGIOSGA017860 Oryza indica BGIOSGA017860 I
BGIOSGA034612 Oryza indica BGIOSGA034612 I
BGIOSGA034615 Oryza indica BGIOSGA034615 N
BGIOSGA036756 Oryza indica BGIOSGA036756 N
BGIOSGA036759 Oryza indica BGIOSGA036759 N
BGIOSGA036760 Oryza indica BGIOSGA036760 N
Bra028918 Brassica rapa Bra028918 I
BRADI1G63910 Brachypodium distachyon BRADI1G63910 N
BRADI4G25717 Brachypodium distachyon BRADI4G25717 N
BRADI4G44350 Brachypodium distachyon BRADI4G44350 I
BRADI4G44360 Brachypodium distachyon BRADI4G44360 I
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N
Ca_09495 Cicer arietinum Ca_09495 I
Ca_12915 Cicer arietinum Ca_12915 I
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I
F775_00757 Aegilops tauschii F775_00757 I
F775_02479 Aegilops tauschii F775_02479 N
F775_02480 Aegilops tauschii F775_02480 N
F775_04232 Aegilops tauschii F775_04232 N
F775_28648 Aegilops tauschii F775_28648 N
F775_31089 Aegilops tauschii F775_31089 N
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I
GRMZM2G030272 Zea mays GRMZM2G030272 N
GRMZM2G059562 Zea mays GRMZM2G059562 I
GRMZM2G065290 Zea mays GRMZM2G065290 I
GRMZM2G099593 Zea mays GRMZM2G099593 N
GRMZM2G169564 Zea mays GRMZM2G169564 N
GRMZM2G400559 Zea mays GRMZM2G400559 N
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I
LPERR03G13630 Leersia perrieri LPERR03G13630 N
LPERR05G06630 Leersia perrieri LPERR05G06630 I
LPERR05G16170 Leersia perrieri LPERR05G16170 I
LPERR08G11030 Leersia perrieri LPERR08G11030 I
LPERR10G04210 Leersia perrieri LPERR10G04210 I
LPERR11G00950 Leersia perrieri LPERR11G00950 N
LPERR11G00960 Leersia perrieri LPERR11G00960 I
LPERR11G00970 Leersia perrieri LPERR11G00970 N
LPERR12G01060 Leersia perrieri LPERR12G01060 N
LPERR12G01080 Leersia perrieri LPERR12G01080 N
MLOC_34522 Hordeum vulgare MLOC_34522 N
MLOC_57051 Hordeum vulgare MLOC_57051 I
MLOC_57764 Hordeum vulgare MLOC_57764 N
MTR_2g075610 Medicago truncatula MTR_2g075610 I
MTR_2g075700 Medicago truncatula MTR_2g075700 I
MTR_2g075750 Medicago truncatula MTR_2g075750 I
MTR_7g073380 Medicago truncatula MTR_7g073380 I
OB01G44170 Oryza brachyantha OB01G44170 I
OB03G25300 Oryza brachyantha OB03G25300 N
OB05G17240 Oryza brachyantha OB05G17240 I
OB11G10740 Oryza brachyantha OB11G10740 N
OB11G10760 Oryza brachyantha OB11G10760 N
OB12G11010 Oryza brachyantha OB12G11010 N
OB12G11030 Oryza brachyantha OB12G11030 N
OBART01G35380 Oryza barthii OBART01G35380 I
OBART03G15470 Oryza barthii OBART03G15470 N
OBART05G08130 Oryza barthii OBART05G08130 I
OBART05G20330 Oryza barthii OBART05G20330 I
OBART11G01090 Oryza barthii OBART11G01090 N
OBART11G01110 Oryza barthii OBART11G01110 I
OBART12G00800 Oryza barthii OBART12G00800 N
OBART12G00820 Oryza barthii OBART12G00820 N
OBART12G00850 Oryza barthii OBART12G00850 N
OGLUM01G39390 Oryza glumaepatula OGLUM01G39390 I
OGLUM03G15660 Oryza glumaepatula OGLUM03G15660 N
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I
OGLUM12G01270 Oryza glumaepatula OGLUM12G01270 N
OGLUM12G01320 Oryza glumaepatula OGLUM12G01320 N
OLONG_000636 Oryza longistaminata OLONG_000636 I
OLONG_001744 Oryza longistaminata OLONG_001744 N
OLONG_019907 Oryza longistaminata OLONG_019907 I
OLONG_027124 Oryza longistaminata OLONG_027124 I
OLONG_028722 Oryza longistaminata OLONG_028722 N
OMERI01G32510 Oryza meridionalis OMERI01G32510 I
OMERI05G18250 Oryza meridionalis OMERI05G18250 I
OMERI11G01570 Oryza meridionalis OMERI11G01570 N
OMERI12G00120 Oryza meridionalis OMERI12G00120 N
ONIVA01G40390 Oryza nivara ONIVA01G40390 I
ONIVA03G16490 Oryza nivara ONIVA03G16490 N
ONIVA05G08650 Oryza nivara ONIVA05G08650 I
ONIVA05G21460 Oryza nivara ONIVA05G21460 I
ONIVA11G01030 Oryza nivara ONIVA11G01030 N
ONIVA11G01240 Oryza nivara ONIVA11G01240 I
ONIVA12G00800 Oryza nivara ONIVA12G00800 N
OPUNC01G34280 Oryza punctata OPUNC01G34280 I
OPUNC03G15030 Oryza punctata OPUNC03G15030 N
OPUNC05G07410 Oryza punctata OPUNC05G07410 I
OPUNC05G17980 Oryza punctata OPUNC05G17980 I
OPUNC11G00930 Oryza punctata OPUNC11G00930 N
OPUNC11G00940 Oryza punctata OPUNC11G00940 N
OPUNC11G00980 Oryza punctata OPUNC11G00980 N
OPUNC12G00950 Oryza punctata OPUNC12G00950 N
OPUNC12G00960 Oryza punctata OPUNC12G00960 N
OPUNC12G00990 Oryza punctata OPUNC12G00990 N
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I
ORGLA01G0292200 Oryza glaberrima ORGLA01G0292200 I
ORGLA03G0148400 Oryza glaberrima ORGLA03G0148400 N
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I
ORGLA11G0201700 Oryza glaberrima ORGLA11G0201700 N
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I
ORGLA12G0007100 Oryza glaberrima ORGLA12G0007100 N
ORGLA12G0007300 Oryza glaberrima ORGLA12G0007300 N
ORGLA12G0007600 Oryza glaberrima ORGLA12G0007600 N
ORUFI01G38690 Oryza rufipogon ORUFI01G38690 I
ORUFI03G16080 Oryza rufipogon ORUFI03G16080 N
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I
ORUFI11G01040 Oryza rufipogon ORUFI11G01040 N
ORUFI12G01140 Oryza rufipogon ORUFI12G01140 N
ORUFI12G01160 Oryza rufipogon ORUFI12G01160 N
OS01G0821600 Oryza sativa OS01G0821600 I
OS03G0321700 Oryza sativa OS03G0321700 N
OS05G0478800 Oryza sativa OS05G0478800 I
OS11G0116900 Oryza sativa OS11G0116900 N
OS11G0117500 Oryza sativa OS11G0117500 N
OS12G0116400 Oryza sativa OS12G0116400 N
OS12G0116700 Oryza sativa OS12G0116700 N
Pavir.Ca00084 Panicum virgatum Pavir.Ca00084 N
Pavir.Ca00178 Panicum virgatum Pavir.Ca00178 N
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I
Pavir.Ea03258 Panicum virgatum Pavir.Ea03258 I
Pavir.Eb03563 Panicum virgatum Pavir.Eb03563 I
Pavir.Ga02545 Panicum virgatum Pavir.Ga02545 N
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I
Pavir.Hb02025 Panicum virgatum Pavir.Hb02025 N
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N
Pavir.J09582 Panicum virgatum Pavir.J09582 N
Pavir.J31578 Panicum virgatum Pavir.J31578 N
Pavir.J34713 Panicum virgatum Pavir.J34713 N
Pavir.J39511 Panicum virgatum Pavir.J39511 I
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I
PK10616.1 Cannabis sativa PK10616.1 I
Sb01g036870 Sorghum bicolor Sb01g036870 N
Sb03g038180 Sorghum bicolor Sb03g038180 I
Sb03g038210 Sorghum bicolor Sb03g038210 I
Sb05g001170 Sorghum bicolor Sb05g001170 N
Sb05g001220 Sorghum bicolor Sb05g001220 N
Sb08g002560 Sorghum bicolor Sb08g002560 N
WRKY38 Arabidopsis lyrata scaffold_602308.1 I
Si002401m.g Setaria italica Si002401m.g I
Si010706m.g Setaria italica Si010706m.g N
Si010764m.g Setaria italica Si010764m.g N
Si011007m.g Setaria italica Si011007m.g N
Si019098m.g Setaria italica Si019098m.g N
Si025181m.g Setaria italica Si025181m.g I
Si026670m.g Setaria italica Si026670m.g N
Si026831m.g Setaria italica Si026831m.g N
Si027769m.g Setaria italica Si027769m.g N
Si027876m.g Setaria italica Si027876m.g N
Si027998m.g Setaria italica Si027998m.g N
Si028202m.g Setaria italica Si028202m.g I
Si028270m.g Setaria italica Si028270m.g N
Si039519m.g Setaria italica Si039519m.g N
TCM_019689 Theobroma cacao TCM_019689 I
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I
Traes_4AL_9E0D1CFA6 Triticum aestivum Traes_4AL_9E0D1CFA6 N
Traes_4AS_70DF607CC Triticum aestivum Traes_4AS_70DF607CC N
Traes_4BL_A8C6FBEB6 Triticum aestivum Traes_4BL_A8C6FBEB6 N
Traes_4BS_A6D9EB0E5 Triticum aestivum Traes_4BS_A6D9EB0E5 N
Traes_4DL_3140A8240 Triticum aestivum Traes_4DL_3140A8240 N
Traes_4DS_FE38A59D0 Triticum aestivum Traes_4DS_FE38A59D0 N
Traes_5AL_69A969FF4 Triticum aestivum Traes_5AL_69A969FF4 N
TRIUR3_01445 Triticum urartu TRIUR3_01445 N
TRIUR3_01447 Triticum urartu TRIUR3_01447 N
TRIUR3_06231 Triticum urartu TRIUR3_06231 N
TRIUR3_26571 Triticum urartu TRIUR3_26571 N