CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0002s24750
(
Populus trichocarpa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
POPTR_0002s24750
T004607_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0002s24750.1
AP2
107
155
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAARLYDRAAFMCGRE
POPTR_0002s24750.2
AP2
107
155
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAARLYDRAAFMCGRE
POPTR_0002s24750.3
AP2
107
155
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAARLYDRAAFMCGRE
POPTR_0002s24750.4
AP2
107
155
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAARLYDRAAFMCGRE
Links
Other
AP2
family TFs
Other
Populus trichocarpa
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29801.m003200
Ricinus communis
29801.m003200
N
0.000
AT3G19184
Arabidopsis thaliana
AT3G19184
N
0.000
Bo6g124000
Brassica oleracea
Bo6g124000
N
0.000
Bostr.19424s0744
Boechera stricta
Bostr.19424s0744
N
0.000
Bra035129
Brassica rapa
Bra035129
N
0.000
Cagra.5742s0010
Capsella grandiflora
Cagra.5742s0010
N
0.000
Carubv10014420m.g
Capsella rubella
Carubv10014420m.g
N
0.000
Ciclev10029072m.g
Citrus clementina
Ciclev10029072m.g
N
0.000
Cla016258
Citrullus lanatus
Cla016258
N
0.000
Cucsa.219930
Cucumis sativus
Cucsa.219930
N
0.000
evm.TU.supercontig_62.23
Carica papaya
evm.TU.supercontig_62.23
N
0.000
fgenesh2_kg.3__2134__AT3G19184.1
Arabidopsis lyrata
fgenesh2_kg.3__2134__AT3G19184.1
N
0.000
Gorai.013G042700
Gossypium raimondii
Gorai.013G042700
N
0.000
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
0.000
Lus10019870.g
Linum usitatissimum
Lus10019870.g
N
0.000
mgf008645m
Mimulus guttatus
mgf008645m
N
0.000
orange1.1g036915m.g
Citrus sinensis
orange1.1g036915m.g
N
0.000
PGSC0003DMG400025792
Solanum tuberosum
PGSC0003DMG400025792
N
0.000
PK25650.1
Cannabis sativa
PK25650.1
N
0.000
POPTR_0009s10590
Populus trichocarpa
POPTR_0009s10590
N
0.000
SapurV1A.0090s0770
Salix purpurea
SapurV1A.0090s0770
N
0.000
Solyc01g108140.2
Solanum lycopersicum
Solyc01g108140.2
N
0.000
TCM_007039
Theobroma cacao
TCM_007039
N
0.000
VIT_03s0063g00620
Vitis vinifera
VIT_03s0063g00620
N
0.000