Sb05g006275 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb05g006275 T005012_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M09710_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_01 		0.843 0.906
DREB1A
M09711_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SED_Q2 		0.843 0.906
Q8GZQ2_MAIZE
M09720_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_02 		0.743 0.811
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb05g006275.1 AP2 33 86

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29838.m001690 Ricinus communis 29838.m001690 I 0.000
AMTR_s00053p00228660 Amborella trichopoda AMTR_s00053p00228660 I 0.000
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.000
Aquca_009_00337 Aquilegia coerulea Aquca_009_00337 I 0.000
Aquca_015_00177 Aquilegia coerulea Aquca_015_00177 I 0.000
SVP Arabidopsis thaliana AT2G22540 D 0.000
AGL79 Arabidopsis thaliana AT3G30260 I 0.000
AGL24 Arabidopsis thaliana AT4G24540 I 0.000
AGL15 Arabidopsis thaliana AT5G13790 D 0.000
BGIOSGA011317 Oryza indica BGIOSGA011317 I 0.000
Bo1g039080 Brassica oleracea Bo1g039080 I 0.000
Bo4g149800 Brassica oleracea Bo4g149800 I 0.000
Bo7g109590 Brassica oleracea Bo7g109590 I 0.000
Bo8g101000 Brassica oleracea Bo8g101000 I 0.000
Bostr.19427s0024 Boechera stricta Bostr.19427s0024 I 0.000
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.000
Bostr.7867s0261 Boechera stricta Bostr.7867s0261 I 0.000
Bra013812 Brassica rapa Bra013812 I 0.000
Bra019221 Brassica rapa Bra019221 I 0.000
Bra030228 Brassica rapa Bra030228 I 0.000
Bra038511 Brassica rapa Bra038511 I 0.000
BRADI1G72150 Brachypodium distachyon BRADI1G72150 I 0.000
squamosa Antirrhinum majus CAA45228.1 D 0.000
Cagra.1080s0011 Capsella grandiflora Cagra.1080s0011 I 0.000
Cagra.2171s0007 Capsella grandiflora Cagra.2171s0007 I 0.000
Carubv10005653m.g Capsella rubella Carubv10005653m.g I 0.000
Carubv10023941m.g Capsella rubella Carubv10023941m.g I 0.000
cassava1567.valid.m1 Manihot esculenta cassava1567.valid.m1 I 0.000
cassava31070.valid.m1 Manihot esculenta cassava31070.valid.m1 I 0.000
cassava31071.valid.m1 Manihot esculenta cassava31071.valid.m1 I 0.000
cassava39138.m1 Manihot esculenta cassava39138.m1 I 0.000
cassava42879.valid.m1 Manihot esculenta cassava42879.valid.m1 I 0.000
Ca_01491 Cicer arietinum Ca_01491 I 0.000
Ca_12416 Cicer arietinum Ca_12416 I 0.000
Ca_21060 Cicer arietinum Ca_21060 I 0.000
chr4.CM0100.30.nc Lotus japonicus chr4.CM0100.30.nc I 0.000
Ciclev10026457m.g Citrus clementina Ciclev10026457m.g I 0.000
Ciclev10029776m.g Citrus clementina Ciclev10029776m.g I 0.000
Cla013108 Citrullus lanatus Cla013108 N 0.000
Cla014322 Citrullus lanatus Cla014322 I 0.000
Cla022499 Citrullus lanatus Cla022499 I 0.000
Cucsa.104010 Cucumis sativus Cucsa.104010 I 0.000
Cucsa.160640 Cucumis sativus Cucsa.160640 I 0.000
Cucsa.190400 Cucumis sativus Cucsa.190400 N 0.000
Cucsa.331840 Cucumis sativus Cucsa.331840 I 0.000
Eucgr.F00420 Eucalyptus grandis Eucgr.F00420 I 0.000
Eucgr.F02141 Eucalyptus grandis Eucgr.F02141 I 0.000
Eucgr.F02146 Eucalyptus grandis Eucgr.F02146 I 0.000
Eucgr.I00556 Eucalyptus grandis Eucgr.I00556 I 0.000
evm.TU.contig_33612 Carica papaya evm.TU.contig_33612 I 0.000
evm.TU.supercontig_21.11 Carica papaya evm.TU.supercontig_21.11 I 0.000
evm.TU.supercontig_55.31 Carica papaya evm.TU.supercontig_55.31 I 0.000
F775_26069 Aegilops tauschii F775_26069 I 0.000
SVP Arabidopsis lyrata fgenesh2_kg.4__174__AT2G22540.1 I 0.000
AGL24 Arabidopsis lyrata fgenesh2_kg.7__1822__AT4G24540.1 I 0.000
gene03714-v1.0-hybrid Fragaria vesca gene03714-v1.0-hybrid I 0.000
gene05180-v1.0-hybrid Fragaria vesca gene05180-v1.0-hybrid I 0.000
gene12120-v1.0-hybrid Fragaria vesca gene12120-v1.0-hybrid I 0.000
gene20808-v1.0-hybrid Fragaria vesca gene20808-v1.0-hybrid I 0.000
gene29503-v1.0-hybrid Fragaria vesca gene29503-v1.0-hybrid I 0.000
GLYMA01G02880 Glycine max GLYMA01G02880 I 0.000
GLYMA02G04710 Glycine max GLYMA02G04710 I 0.000
GLYMA04G10015 Glycine max GLYMA04G10015 I 0.000
GLYMA06G10020 Glycine max GLYMA06G10020 I 0.000
GLYMA07G30040 Glycine max GLYMA07G30040 I 0.000
GLYMA08G07260 Glycine max GLYMA08G07260 I 0.000
GLYMA11G16105 Glycine max GLYMA11G16105 I 0.000
GLYMA12G17721 Glycine max GLYMA12G17721 I 0.000
GLYMA13G33031 Glycine max GLYMA13G33031 I 0.000
GLYMA13G33051 Glycine max GLYMA13G33051 I 0.000
GLYMA15G06302 Glycine max GLYMA15G06302 I 0.000
GLYMA15G06314 Glycine max GLYMA15G06314 I 0.000
Gorai.002G142700 Gossypium raimondii Gorai.002G142700 I 0.000
Gorai.005G225500 Gossypium raimondii Gorai.005G225500 I 0.000
Gorai.008G017200 Gossypium raimondii Gorai.008G017200 I 0.000
Gorai.008G092300 Gossypium raimondii Gorai.008G092300 I 0.000
Gorai.010G035000 Gossypium raimondii Gorai.010G035000 I 0.000
Gorai.013G055700 Gossypium raimondii Gorai.013G055700 I 0.000
GRMZM2G046885 Zea mays GRMZM2G046885 I 0.000
GRMZM2G059102 Zea mays GRMZM2G059102 I 0.000
GSMUA_Achr10G19290_001 Musa acuminata GSMUA_Achr10G19290_001 I 0.000
GSMUA_Achr3G06800_001 Musa acuminata GSMUA_Achr3G06800_001 I 0.000
GSMUA_Achr9G15180_001 Musa acuminata GSMUA_Achr9G15180_001 I 0.000
LjT38P01.180.nd Lotus japonicus LjT38P01.180.nd I 0.000
LPERR02G27330 Leersia perrieri LPERR02G27330 I 0.000
LPERR03G05670 Leersia perrieri LPERR03G05670 I 0.000
Lus10025719.g Linum usitatissimum Lus10025719.g I 0.000
Lus10035942.g Linum usitatissimum Lus10035942.g I 0.000
MDP0000209705 Malus domestica MDP0000209705 I 0.000
MDP0000233948 Malus domestica MDP0000233948 I 0.000
mgf015964m Mimulus guttatus mgf015964m I 0.000
mgf023192m Mimulus guttatus mgf023192m I 0.000
mgf025830m Mimulus guttatus mgf025830m I 0.000
MTR_1g041615 Medicago truncatula MTR_1g041615 I 0.000
MTR_4g093970 Medicago truncatula MTR_4g093970 I 0.000
MTR_5g032150 Medicago truncatula MTR_5g032150 I 0.000
MTR_5g032520 Medicago truncatula MTR_5g032520 I 0.000
MTR_5g066180 Medicago truncatula MTR_5g066180 I 0.000
OB11G21480 Oryza brachyantha OB11G21480 I 0.000
OBART03G06320 Oryza barthii OBART03G06320 I 0.000
OGLUM03G06330 Oryza glumaepatula OGLUM03G06330 I 0.000
OMERI03G06190 Oryza meridionalis OMERI03G06190 I 0.000
ONIVA02G06550 Oryza nivara ONIVA02G06550 I 0.000
OPUNC03G06100 Oryza punctata OPUNC03G06100 I 0.000
orange1.1g027190m.g Citrus sinensis orange1.1g027190m.g I 0.000
orange1.1g034384m.g Citrus sinensis orange1.1g034384m.g I 0.000
orange1.1g040972m.g Citrus sinensis orange1.1g040972m.g I 0.000
ORGLA03G0061100 Oryza glaberrima ORGLA03G0061100 I 0.000
ORUFI03G06210 Oryza rufipogon ORUFI03G06210 I 0.000
OS03G0186600 Oryza sativa OS03G0186600 I 0.000
Pavir.Da01333 Panicum virgatum Pavir.Da01333 I 0.000
Pavir.Ia04527 Panicum virgatum Pavir.Ia04527 I 0.000
Pavir.Ib00555 Panicum virgatum Pavir.Ib00555 I 0.000
PGSC0003DMG400009363 Solanum tuberosum PGSC0003DMG400009363 I 0.000
PGSC0003DMG400016203 Solanum tuberosum PGSC0003DMG400016203 I 0.000
PGSC0003DMG400028358 Solanum tuberosum PGSC0003DMG400028358 I 0.000
PGSC0003DMG400033570 Solanum tuberosum PGSC0003DMG400033570 I 0.000
PK11571.1 Cannabis sativa PK11571.1 I 0.000
PK20651.1 Cannabis sativa PK20651.1 I 0.000
PK28167.1 Cannabis sativa PK28167.1 I 0.000
Pm002166 Prunus mume Pm002166 I 0.000
Pm004416 Prunus mume Pm004416 I 0.000
Pm004420 Prunus mume Pm004420 I 0.000
Pm022002 Prunus mume Pm022002 I 0.000
Pm025026 Prunus mume Pm025026 I 0.000
POPTR_0002s10570 Populus trichocarpa POPTR_0002s10570 I 0.000
POPTR_0007s03270 Populus trichocarpa POPTR_0007s03270 I 0.000
POPTR_0007s03290 Populus trichocarpa POPTR_0007s03290 I 0.000
POPTR_0007s03310 Populus trichocarpa POPTR_0007s03310 I 0.000
POPTR_0007s14300 Populus trichocarpa POPTR_0007s14300 I 0.000
AGL15 Populus trichocarpa POPTR_0009s06060 I 0.000
POPTR_0017s07170 Populus trichocarpa POPTR_0017s07170 I 0.000
PRUPE_ppa010308mg Prunus persica PRUPE_ppa010308mg I 0.000
PRUPE_ppa010714mg Prunus persica PRUPE_ppa010714mg I 0.000
PRUPE_ppa010822mg Prunus persica PRUPE_ppa010822mg I 0.000
PRUPE_ppa011063mg Prunus persica PRUPE_ppa011063mg I 0.000
PRUPE_ppa022274mg Prunus persica PRUPE_ppa022274mg I 0.000
Q38742_ANTMA Antirrhinum majus Q38742_ANTMA D 0.000
SapurV1A.0004s1140 Salix purpurea SapurV1A.0004s1140 I 0.000
SapurV1A.0027s0860 Salix purpurea SapurV1A.0027s0860 I 0.000
SapurV1A.0187s0010 Salix purpurea SapurV1A.0187s0010 I 0.000
SapurV1A.0463s0130 Salix purpurea SapurV1A.0463s0130 I 0.000
SapurV1A.1777s0020 Salix purpurea SapurV1A.1777s0020 I 0.000
Sb01g044810 Sorghum bicolor Sb01g044810 I 0.000
Si007641m.g Setaria italica Si007641m.g I 0.000
Si037358m.g Setaria italica Si037358m.g I 0.000
Solyc01g105800.2 Solanum lycopersicum Solyc01g105800.2 I 0.000
Solyc05g056620.1 Solanum lycopersicum Solyc05g056620.1 I 0.000
Solyc11g010570.1 Solanum lycopersicum Solyc11g010570.1 I 0.000
TCM_000992 Theobroma cacao TCM_000992 I 0.000
TCM_007378 Theobroma cacao TCM_007378 I 0.000
TCM_034501 Theobroma cacao TCM_034501 I 0.000
Thhalv10000308m.g Eutrema salsugineum Thhalv10000308m.g I 0.000
Thhalv10005641m.g Eutrema salsugineum Thhalv10005641m.g I 0.000
Thhalv10026757m.g Eutrema salsugineum Thhalv10026757m.g I 0.000
Traes_4BL_410DEBFD3 Triticum aestivum Traes_4BL_410DEBFD3 I 0.000
Traes_4DL_67EFB6303 Triticum aestivum Traes_4DL_67EFB6303 I 0.000
SVP Vitis vinifera VIT_00s0313g00070 I 0.000
VIT_00s0729g00010 Vitis vinifera VIT_00s0729g00010 I 0.000
VIT_03s0017g00360 Vitis vinifera VIT_03s0017g00360 I 0.000
VIT_03s0017g00440 Vitis vinifera VIT_03s0017g00440 I 0.000
VIT_03s0167g00100 Vitis vinifera VIT_03s0167g00100 I 0.000
VIT_15s0024g01860 Vitis vinifera VIT_15s0024g01860 I 0.000
VIT_15s0024g02000 Vitis vinifera VIT_15s0024g02000 I 0.000
VIT_15s0107g00120 Vitis vinifera VIT_15s0107g00120 I 0.000
AGL24 Vitis vinifera VIT_18s0001g07460 I 0.000