gene27021-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene27021-v1.0-hybrid T008438_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.772 0.900
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.772 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna27021.1-v1.0-hybrid AP2 130 181

Links

Other AP2 family TFs
Other Fragaria vesca TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCL7 Arabidopsis thaliana AT3G50650 N 0.000
SCL4 Arabidopsis thaliana AT5G66770 N 0.000
Bo7g064520 Brassica oleracea Bo7g064520 N 0.000
Bostr.0568s0096 Boechera stricta Bostr.0568s0096 N 0.000
Carubv10016973m.g Capsella rubella Carubv10016973m.g N 0.000
Carubv10017026m.g Capsella rubella Carubv10017026m.g N 0.000
fgenesh2_kg.5__1404__AT3G50650.1 Arabidopsis lyrata fgenesh2_kg.5__1404__AT3G50650.1 N 0.000
fgenesh2_kg.8__2739__AT5G66770.1 Arabidopsis lyrata fgenesh2_kg.8__2739__AT5G66770.1 N 0.000
Thhalv10003860m.g Eutrema salsugineum Thhalv10003860m.g N 0.000
Thhalv10011122m.g Eutrema salsugineum Thhalv10011122m.g N 0.000