CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SCL7
(
Arabidopsis thaliana
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AT3G50650
T199833_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G50650.1
GRAS
180
542
AIHDYARKPETKPDTLIRIKESVSESGDPIQRVGYYFAEALSHKETESPSSSSSSSLEDFILSYKTLNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR
Links
Other
GRAS
family TFs
Other
Arabidopsis thaliana
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.5__1404__AT3G50650.1
Arabidopsis lyrata
fgenesh2_kg.5__1404__AT3G50650.1
N
0.938
Bostr.6864s0182
Boechera stricta
Bostr.6864s0182
N
0.915
Carubv10016973m.g
Capsella rubella
Carubv10016973m.g
N
0.887
Carubv10017026m.g
Capsella rubella
Carubv10017026m.g
N
0.878
Thhalv10011122m.g
Eutrema salsugineum
Thhalv10011122m.g
N
0.819
Bostr.0568s0096
Boechera stricta
Bostr.0568s0096
N
0.768
SCL4
Arabidopsis thaliana
AT5G66770
N
0.765
fgenesh2_kg.8__2739__AT5G66770.1
Arabidopsis lyrata
fgenesh2_kg.8__2739__AT5G66770.1
N
0.742
Bo7g064520
Brassica oleracea
Bo7g064520
N
0.728
Thhalv10003860m.g
Eutrema salsugineum
Thhalv10003860m.g
N
0.728