CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.8__2739__AT5G66770.1
(
Arabidopsis lyrata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
fgenesh2_kg.8__2739__AT5G66770.1
T200137_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.8__2739__AT5G66770.1
GRAS
211
564
LLRAIYDCARISESDPNEASKTLVQIRESVSELGDPTERVGFYFTEALSNRLSPDSPATSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATENSNKIHIVDFGIVQGIQWPALLQALATRSSGKPTQIRVSGIPAPSLGDSPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEANLGRDSEERVRVERELFGRRISGLIGPEKTGIHRERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSFVESKPGFISLA
Links
Other
GRAS
family TFs
Other
Arabidopsis lyrata
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCL4
Arabidopsis thaliana
AT5G66770
N
0.925
Bostr.0568s0096
Boechera stricta
Bostr.0568s0096
N
0.914
Thhalv10003860m.g
Eutrema salsugineum
Thhalv10003860m.g
N
0.836
Bra012102
Brassica rapa
Bra012102
N
0.794
Bo7g064520
Brassica oleracea
Bo7g064520
N
0.793
Carubv10016973m.g
Capsella rubella
Carubv10016973m.g
N
0.746
Carubv10017026m.g
Capsella rubella
Carubv10017026m.g
N
0.746
fgenesh2_kg.5__1404__AT3G50650.1
Arabidopsis lyrata
fgenesh2_kg.5__1404__AT3G50650.1
N
0.744
SCL7
Arabidopsis thaliana
AT3G50650
N
0.742
Thhalv10011122m.g
Eutrema salsugineum
Thhalv10011122m.g
N
0.742
Bostr.6864s0182
Boechera stricta
Bostr.6864s0182
N
0.738