Thhalv10027405m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10027405m.g T009998_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.804 0.960
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.804 0.960
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.800 0.940
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.800 0.940
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.800 0.940
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.800 0.940
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.778 0.920
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.778 0.920
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.778 0.920
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.736 0.800
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.736 0.800
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.723 0.760
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.723 0.760
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.723 0.760
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.723 0.760
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.723 0.760
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.723 0.760
Q8S2T3_BRANA
M09745_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF16_01 		0.705 0.900
Q6T3U0_BRANA
M09743_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBII1_01 		0.705 0.900
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.700 0.760
DREB1E
M09709_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_01 		0.690 0.800
DREB1B
M06643_2.00 		Arabidopsis thaliana
DHBRCCGACRHN
NDYGTCGGYVDH		 Dap-seq
OMalley et al.(2016)
CBF1_col_a 		0.679 0.900
DREB1B
M06644_2.00 		Arabidopsis thaliana
NNNHBRCCGACAWNN
NNWTGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF1_colamp_a 		0.679 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10027405m AP2 49 100

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005960 Calypte anna Aan_R005960 I 0.000
Aan_R013385 Calypte anna Aan_R013385 I 0.000
Afo_R003301 Aptenodytes forsteri Afo_R003301 I 0.000
Afo_R010233 Aptenodytes forsteri Afo_R010233 I 0.000
Alligator_sinensis_CCG011609.1 Alligator sinensis Alligator_sinensis_CCG011609.1 I 0.000
Brh_R004866 Buceros rhinoceros Brh_R004866 I 0.000
Brh_R005208 Buceros rhinoceros Brh_R005208 I 0.000
Cmyd_10010564 Chelonia mydas Cmyd_10010564 I 0.000
Cmyd_10015921 Chelonia mydas Cmyd_10015921 I 0.000
TP73 Anolis carolinensis ENSACAG00000001622 I 0.000
ENSAMEG00000000763 Ailuropoda melanoleuca ENSAMEG00000000763 I 0.000
ENSAMEG00000009237 Ailuropoda melanoleuca ENSAMEG00000009237 I 0.000
ENSAMXG00000004843 Astyanax mexicanus ENSAMXG00000004843 I 0.000
ENSAMXG00000013958 Astyanax mexicanus ENSAMXG00000013958 I 0.000
ENSAPLG00000003880 Anas platyrhynchos ENSAPLG00000003880 I 0.000
ENSAPLG00000012917 Anas platyrhynchos ENSAPLG00000012917 I 0.000
TP73 Bos taurus ENSBTAG00000005812 I 0.000
TP63 Bos taurus ENSBTAG00000015460 I 0.000
TP63 Canis familiaris ENSCAFG00000013961 I 0.000
TP73 Canis familiaris ENSCAFG00000019489 I 0.000
TP63 Choloepus hoffmanni ENSCHOG00000010497 I 0.000
TP63 Callithrix jacchus ENSCJAG00000014256 I 0.000
TP73 Cavia porcellus ENSCPOG00000010908 I 0.000
TP63 Cavia porcellus ENSCPOG00000014770 I 0.000
ENSCSAG00000000724 Chlorocebus sabaeus ENSCSAG00000000724 I 0.000
ENSCSAG00000009062 Chlorocebus sabaeus ENSCSAG00000009062 I 0.000
tp73 Danio rerio ENSDARG00000017953 I 0.000
tp63 Danio rerio ENSDARG00000044356 I 0.000
TP63 Dasypus novemcinctus ENSDNOG00000016582 I 0.000
Trp63 Dipodomys ordii ENSDORG00000002061 I 0.000
TP73 Equus caballus ENSECAG00000000771 I 0.000
TP63 Equus caballus ENSECAG00000018546 I 0.000
TP73 Erinaceus europaeus ENSEEUG00000013128 I 0.000
ENSFALG00000007393 Ficedula albicollis ENSFALG00000007393 I 0.000
ENSFALG00000009625 Ficedula albicollis ENSFALG00000009625 I 0.000
TP63 Felis catus ENSFCAG00000000790 I 0.000
TP73 Felis catus ENSFCAG00000011627 I 0.000
TP63 Homo sapiens ENSG00000073282 D 0.000
TP73 Homo sapiens ENSG00000078900 D 0.000
tp73 Gasterosteus aculeatus ENSGACG00000006547 I 0.000
ENSGACG00000013629 Gasterosteus aculeatus ENSGACG00000013629 I 0.000
TP73 Gallus gallus ENSGALG00000001006 I 0.000
TP63 Gallus gallus ENSGALG00000007324 I 0.000
TP63 Gorilla gorilla ENSGGOG00000005113 I 0.000
TP73 Gorilla gorilla ENSGGOG00000015559 I 0.000
ENSGMOG00000000413 Gadus morhua ENSGMOG00000000413 I 0.000
ENSLACG00000014214 Latimeria chalumnae ENSLACG00000014214 I 0.000
ENSLACG00000019068 Latimeria chalumnae ENSLACG00000019068 I 0.000
TP73 Loxodonta africana ENSLAFG00000007013 I 0.000
TP63 Loxodonta africana ENSLAFG00000031461 I 0.000
ENSLOCG00000005148 Lepisosteus oculatus ENSLOCG00000005148 I 0.000
ENSLOCG00000005255 Lepisosteus oculatus ENSLOCG00000005255 I 0.000
TP73 Meleagris gallopavo ENSMGAG00000001562 I 0.000
TP63 Meleagris gallopavo ENSMGAG00000007535 I 0.000
TP63 Microcebus murinus ENSMICG00000005240 I 0.000
TP63 Macaca mulatta ENSMMUG00000016466 I 0.000
TP73 Macaca mulatta ENSMMUG00000016569 I 0.000
TP63 Monodelphis domestica ENSMODG00000015060 I 0.000
ENSMPUG00000003438 Mustela putorius furo ENSMPUG00000003438 I 0.000
ENSMPUG00000007407 Mustela putorius furo ENSMPUG00000007407 I 0.000
Trp63 Mus musculus ENSMUSG00000022510 D 0.000
Trp73 Mus musculus ENSMUSG00000029026 D 0.000
ENSNLEG00000006723 Nomascus leucogenys ENSNLEG00000006723 I 0.000
TP63 Ornithorhynchus anatinus ENSOANG00000013795 I 0.000
ENSOARG00000015833 Ovis aries ENSOARG00000015833 I 0.000
ENSOARG00000020478 Ovis aries ENSOARG00000020478 I 0.000
TP63 Oryctolagus cuniculus ENSOCUG00000016465 I 0.000
TP63 Otolemur garnettii ENSOGAG00000003838 I 0.000
TP73 Otolemur garnettii ENSOGAG00000006041 I 0.000
ENSONIG00000002106 Oreochromis niloticus ENSONIG00000002106 I 0.000
ENSONIG00000019325 Oreochromis niloticus ENSONIG00000019325 I 0.000
tp73 Oryzias latipes ENSORLG00000004402 I 0.000
tp63 Oryzias latipes ENSORLG00000015665 I 0.000
ENSP00000264731 Macaca fascicularis ENSP00000264731 I 0.000
ENSP00000264731-D1 Bos grunniens ENSP00000264731-D1 I 0.000
ENSP00000367545 Macaca fascicularis ENSP00000367545 I 0.000
ENSP00000367545-D1 Bos grunniens ENSP00000367545-D1 I 0.000
ENSPANG00000006656 Papio anubis ENSPANG00000006656 I 0.000
ENSPANG00000010294 Papio anubis ENSPANG00000010294 I 0.000
TP73 Procavia capensis ENSPCAG00000000703 I 0.000
TP63 Procavia capensis ENSPCAG00000005011 I 0.000
ENSPFOG00000000910 Poecilia formosa ENSPFOG00000000910 I 0.000
ENSPFOG00000010828 Poecilia formosa ENSPFOG00000010828 I 0.000
ENSPMAG00000009535 Petromyzon marinus ENSPMAG00000009535 I 0.000
ENSPPYG00000014401 Pongo abelii ENSPPYG00000014401 I 0.000
ENSPSIG00000004164 Pelodiscus sinensis ENSPSIG00000004164 I 0.000
ENSPSIG00000016009 Pelodiscus sinensis ENSPSIG00000016009 I 0.000
TP63 Pan troglodytes ENSPTRG00000015733 I 0.000
TP73 Pteropus vampyrus ENSPVAG00000008937 I 0.000
TP63 Pteropus vampyrus ENSPVAG00000009056 I 0.000
Tp63 Rattus norvegicus ENSRNOG00000001924 I 0.000
Tp73 Rattus norvegicus ENSRNOG00000024707 I 0.000
TP63 Sorex araneus ENSSARG00000012752 I 0.000
ENSSHAG00000005668 Sarcophilus harrisii ENSSHAG00000005668 I 0.000
TP63 Sus scrofa ENSSSCG00000025592 I 0.000
TP73 Sus scrofa ENSSSCG00000025685 I 0.000
ENSSTOG00000013771 Ictidomys tridecemlineatus ENSSTOG00000013771 I 0.000
ENSSTOG00000029194 Ictidomys tridecemlineatus ENSSTOG00000029194 I 0.000
TP63 Tupaia belangeri ENSTBEG00000004215 I 0.000
TP73 Taeniopygia guttata ENSTGUG00000002743 I 0.000
TP63 Taeniopygia guttata ENSTGUG00000009377 I 0.000
tp73 Tetraodon nigroviridis ENSTNIG00000011978 I 0.000
tp63 Tetraodon nigroviridis ENSTNIG00000013774 I 0.000
tp63 Takifugu rubripes ENSTRUG00000003420 I 0.000
tp73 Takifugu rubripes ENSTRUG00000014931 I 0.000
ENSTSYG00000003709 Tarsius syrichta ENSTSYG00000003709 I 0.000
TP73 Tursiops truncatus ENSTTRG00000003435 I 0.000
TP63 Tursiops truncatus ENSTTRG00000011638 I 0.000
TP63 Vicugna pacos ENSVPAG00000012350 I 0.000
ENSXMAG00000016425 Xiphophorus maculatus ENSXMAG00000016425 I 0.000
ENSXMAG00000017360 Xiphophorus maculatus ENSXMAG00000017360 I 0.000
Gfo_R004420 Geospiza fortis Gfo_R004420 I 0.000
Gfo_R009749 Geospiza fortis Gfo_R009749 I 0.000
Myotis_brandtii_Tp63_10011644 Myotis brandtii Myotis_brandtii_Tp63_10011644 I 0.000
Ogr07265 Ophisaurus gracilis Ogr07265 I 0.000
Ogr15303 Ophisaurus gracilis Ogr15303 I 0.000
Pvit_07832 Pogona vitticeps Pvit_07832 I 0.000
Pvit_15794 Pogona vitticeps Pvit_15794 I 0.000
Tal_R007660 Tyto alba Tal_R007660 I 0.000
tp63 Xenopus tropicalis XB-GENE-479868 I 0.000
tp73 Xenopus tropicalis XB-GENE-482857 I 0.000
tp63.L Xenopus laevis XB-GENE-865317 I 0.000