Bo7g083910 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo7g083910 T018716_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.779 0.779
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.779 0.779
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g083910.1 B3 96 197

Links

Other B3 family TFs
Other Brassica oleracea TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30131.m006860 Ricinus communis 30131.m006860 I 0.737
FUS3 Arabidopsis thaliana AT3G26790 D 0.779
Bo00285s530 Brassica oleracea Bo00285s530 I 0.768
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I 0.755
Bra032953 Brassica rapa Bra032953 I 0.768
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I 0.779
Carubv10019353m.g Capsella rubella Carubv10019353m.g I 0.779
cassava11393.m1 Manihot esculenta cassava11393.m1 I 0.779
cassava14836.m1 Manihot esculenta cassava14836.m1 I 0.726
Ca_05976 Cicer arietinum Ca_05976 I 0.737
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.779
Cla009252 Citrullus lanatus Cla009252 I 0.747
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.768
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.726
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.737
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.745
MTR_7g083700 Medicago truncatula MTR_7g083700 I 0.758
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I 0.768
Pm016099 Prunus mume Pm016099 I 0.747
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.779
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.747
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.704
TCM_017321 Theobroma cacao TCM_017321 I 0.758
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I 0.755