CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J28012
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.J28012
T023983_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J28012.1.p
B3
131
220
FVKPMTQSHVTGGFWLGLPTPFCRKYLPKRDETIMLEDEEDDEFETLYLVRKMGLSAGWRGFAIEHKLVDGDCLVFQLIERTKFKVSAIH
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA006746
Oryza indica
BGIOSGA006746
I
0.000
OBART02G11160
Oryza barthii
OBART02G11160
I
0.000
OGLUM02G11100
Oryza glumaepatula
OGLUM02G11100
I
0.000
OLONG_021730
Oryza longistaminata
OLONG_021730
N
0.000
OMERI02G11890
Oryza meridionalis
OMERI02G11890
N
0.000
ONIVA02G12490
Oryza nivara
ONIVA02G12490
I
0.000
OPUNC02G09900
Oryza punctata
OPUNC02G09900
I
0.000
ORUFI02G11130
Oryza rufipogon
ORUFI02G11130
I
0.000