gene01678-v1.0-hybrid (Fragaria vesca)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 gene01678-v1.0-hybrid T024854_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna01678.1-v1.0-hybrid BBR 1 310

Links

Other BBR family TFs
Other Fragaria vesca TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28779.m000140 Ricinus communis 28779.m000140 I
AT1G19490 Arabidopsis thaliana AT1G19490 D
Bo5g027510 Brassica oleracea Bo5g027510 I
Bostr.7128s0552 Boechera stricta Bostr.7128s0552 I
Bra025743 Brassica rapa Bra025743 I
Cagra.1961s0053 Capsella grandiflora Cagra.1961s0053 I
Carubv10011417m.g Capsella rubella Carubv10011417m.g I
Ca_00780 Cicer arietinum Ca_00780 I
Ciclev10013541m.g Citrus clementina Ciclev10013541m.g I
Cla017983 Citrullus lanatus Cla017983 I
Cucsa.240980 Cucumis sativus Cucsa.240980 I
evm.TU.supercontig_5.51 Carica papaya evm.TU.supercontig_5.51 I
F775_21880 Aegilops tauschii F775_21880 N
gene30252-v1.0-hybrid Fragaria vesca gene30252-v1.0-hybrid I
GLYMA03G35101 Glycine max GLYMA03G35101 I
GLYMA19G37801 Glycine max GLYMA19G37801 I
Gorai.009G405400 Gossypium raimondii Gorai.009G405400 I
GSMUA_Achr5G17460_001 Musa acuminata GSMUA_Achr5G17460_001 N
GSMUA_Achr9G02570_001 Musa acuminata GSMUA_Achr9G02570_001 N
Lus10003255.g Linum usitatissimum Lus10003255.g I
Lus10035597.g Linum usitatissimum Lus10035597.g I
MDP0000203904 Malus domestica MDP0000203904 I
MLOC_15316 Hordeum vulgare MLOC_15316 N
orange1.1g011345m.g Citrus sinensis orange1.1g011345m.g I
PK09783.1 Cannabis sativa PK09783.1 I
POPTR_0006s11550 Populus trichocarpa POPTR_0006s11550 I
PRUPE_ppa003901mg Prunus persica PRUPE_ppa003901mg I
SapurV1A.0208s0130 Salix purpurea SapurV1A.0208s0130 I
Solyc09g009760.1 Solanum lycopersicum Solyc09g009760.1 I
TCM_022516 Theobroma cacao TCM_022516 I
Thhalv10009681m.g Eutrema salsugineum Thhalv10009681m.g I
Traes_4AL_792F1D482 Triticum aestivum Traes_4AL_792F1D482 N
Traes_4BS_8439AC445 Triticum aestivum Traes_4BS_8439AC445 N
Traes_4DS_FAFED0328 Triticum aestivum Traes_4DS_FAFED0328 N
VIT_08s0007g03640 Vitis vinifera VIT_08s0007g03640 I