BGIOSGA001450 (Oryza indica)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 BGIOSGA001450 T025563_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA001450-PA BED ZF 176 221
BGIOSGA001450-PA BED ZF 314 354
BGIOSGA001450-PA BED ZF 506 552
BGIOSGA001450-PA BED ZF 611 656

Links

Other BED ZF family TFs
Other Oryza indica TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30190.m011004 Ricinus communis 30190.m011004 I
AMTR_s00049p00074250 Amborella trichopoda AMTR_s00049p00074250 I
AMTR_s00091p00025820 Amborella trichopoda AMTR_s00091p00025820 I
Aquca_013_00661 Aquilegia coerulea Aquca_013_00661 I
MYB20 Arabidopsis thaliana AT1G66230 I
MYB42 Arabidopsis thaliana AT4G12350 I
MYB85 Arabidopsis thaliana AT4G22680 I
MYB43 Arabidopsis thaliana AT5G16600 D
MYB99 Arabidopsis thaliana AT5G62320 D
BGIOSGA005676 Oryza indica BGIOSGA005676 I
BGIOSGA022649 Oryza indica BGIOSGA022649 I
BGIOSGA026529 Oryza indica BGIOSGA026529 I
BGIOSGA028709 Oryza indica BGIOSGA028709 I
BGIOSGA029380 Oryza indica BGIOSGA029380 I
BGIOSGA030727 Oryza indica BGIOSGA030727 I
Bo1g028520 Brassica oleracea Bo1g028520 I
Bo2g013190 Brassica oleracea Bo2g013190 I
Bo3g107740 Brassica oleracea Bo3g107740 I
Bo3g165540 Brassica oleracea Bo3g165540 I
Bo6g099800 Brassica oleracea Bo6g099800 I
Bo7g108060 Brassica oleracea Bo7g108060 I
Bo9g163020 Brassica oleracea Bo9g163020 I
Bostr.0568s0574 Boechera stricta Bostr.0568s0574 I
Bostr.25463s0081 Boechera stricta Bostr.25463s0081 I
Bostr.26959s0295 Boechera stricta Bostr.26959s0295 I
Bostr.2902s0397 Boechera stricta Bostr.2902s0397 I
Bostr.7867s0052 Boechera stricta Bostr.7867s0052 I
Bra004155 Brassica rapa Bra004155 I
Bra013633 Brassica rapa Bra013633 I
Bra019368 Brassica rapa Bra019368 I
Bra020837 Brassica rapa Bra020837 I
BRADI3G36370 Brachypodium distachyon BRADI3G36370 I
BRADI3G42430 Brachypodium distachyon BRADI3G42430 I
BRADI3G56917 Brachypodium distachyon BRADI3G56917 I
BRADI4G29796 Brachypodium distachyon BRADI4G29796 I
BRADI4G36210 Brachypodium distachyon BRADI4G36210 I
Cagra.0434s0026 Capsella grandiflora Cagra.0434s0026 I
Cagra.1300s0004 Capsella grandiflora Cagra.1300s0004 I
Cagra.14303s0002 Capsella grandiflora Cagra.14303s0002 I
Cagra.4003s0023 Capsella grandiflora Cagra.4003s0023 I
Cagra.6652s0005 Capsella grandiflora Cagra.6652s0005 I
Carubv10001378m.g Capsella rubella Carubv10001378m.g I
Carubv10003172m.g Capsella rubella Carubv10003172m.g I
Carubv10005483m.g Capsella rubella Carubv10005483m.g I
Carubv10020766m.g Capsella rubella Carubv10020766m.g I
Carubv10028436m.g Capsella rubella Carubv10028436m.g I
cassava2058.valid.m1 Manihot esculenta cassava2058.valid.m1 I
cassava21367.m1 Manihot esculenta cassava21367.m1 I
cassava30009.valid.m1 Manihot esculenta cassava30009.valid.m1 I
cassava33331.m1 Manihot esculenta cassava33331.m1 I
cassava47045.m1 Manihot esculenta cassava47045.m1 I
cassava6251.valid.m1 Manihot esculenta cassava6251.valid.m1 I
Ca_08722 Cicer arietinum Ca_08722 I
Ca_13286 Cicer arietinum Ca_13286 I
chr4.CM0126.370.nd Lotus japonicus chr4.CM0126.370.nd I
Ciclev10005666m.g Citrus clementina Ciclev10005666m.g I
Ciclev10012265m.g Citrus clementina Ciclev10012265m.g I
Ciclev10021695m.g Citrus clementina Ciclev10021695m.g I
Cla003626 Citrullus lanatus Cla003626 I
Cla009311 Citrullus lanatus Cla009311 I
Cla011736 Citrullus lanatus Cla011736 I
Cucsa.006170 Cucumis sativus Cucsa.006170 I
Cucsa.115620 Cucumis sativus Cucsa.115620 I
Cucsa.302180 Cucumis sativus Cucsa.302180 I
Cucsa.375180 Cucumis sativus Cucsa.375180 I
Eucgr.D02014 Eucalyptus grandis Eucgr.D02014 I
Eucgr.F02864 Eucalyptus grandis Eucgr.F02864 I
Eucgr.J01601 Eucalyptus grandis Eucgr.J01601 I
Eucgr.K00153 Eucalyptus grandis Eucgr.K00153 I
evm.TU.supercontig_3.300 Carica papaya evm.TU.supercontig_3.300 I
F775_13107 Aegilops tauschii F775_13107 I
F775_17058 Aegilops tauschii F775_17058 I
F775_19511 Aegilops tauschii F775_19511 I
F775_29159 Aegilops tauschii F775_29159 I
MYB42 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002571 I
MYB85 Arabidopsis lyrata fgenesh2_kg.7__2034__AT4G22680.1 I
gene21264-v1.0-hybrid Fragaria vesca gene21264-v1.0-hybrid I
gene30520-v1.0-hybrid Fragaria vesca gene30520-v1.0-hybrid I
gene32268-v1.0-hybrid Fragaria vesca gene32268-v1.0-hybrid I
GLYMA01G42050 Glycine max GLYMA01G42050 I
GLYMA02G41180 Glycine max GLYMA02G41180 I
GLYMA05G03780 Glycine max GLYMA05G03780 I
GLYMA11G03300 Glycine max GLYMA11G03300 I
GLYMA11G33620 Glycine max GLYMA11G33620 I
GLYMA14G39530 Glycine max GLYMA14G39530 I
GLYMA17G14291 Glycine max GLYMA17G14291 I
GLYMA18G04580 Glycine max GLYMA18G04580 I
Gorai.001G205300 Gossypium raimondii Gorai.001G205300 I
Gorai.003G168100 Gossypium raimondii Gorai.003G168100 I
Gorai.004G064100 Gossypium raimondii Gorai.004G064100 I
Gorai.004G201900 Gossypium raimondii Gorai.004G201900 I
Gorai.006G064000 Gossypium raimondii Gorai.006G064000 I
Gorai.006G195700 Gossypium raimondii Gorai.006G195700 I
Gorai.007G074500 Gossypium raimondii Gorai.007G074500 I
Gorai.008G060100 Gossypium raimondii Gorai.008G060100 I
Gorai.008G238800 Gossypium raimondii Gorai.008G238800 I
GRMZM2G037650 Zea mays GRMZM2G037650 I
GRMZM2G048910 Zea mays GRMZM2G048910 I
GRMZM2G055158 Zea mays GRMZM2G055158 I
GRMZM2G104551 Zea mays GRMZM2G104551 I
GRMZM2G106558 Zea mays GRMZM2G106558 I
GRMZM2G126566 Zea mays GRMZM2G126566 I
GRMZM2G138427 Zea mays GRMZM2G138427 I
GRMZM2G169356 Zea mays GRMZM2G169356 I
GSMUA_Achr10G29970_001 Musa acuminata GSMUA_Achr10G29970_001 I
GSMUA_Achr1G18610_001 Musa acuminata GSMUA_Achr1G18610_001 I
GSMUA_Achr4G19880_001 Musa acuminata GSMUA_Achr4G19880_001 I
GSMUA_Achr5G05910_001 Musa acuminata GSMUA_Achr5G05910_001 I
GSMUA_Achr5G23110_001 Musa acuminata GSMUA_Achr5G23110_001 I
GSMUA_Achr6G06800_001 Musa acuminata GSMUA_Achr6G06800_001 I
GSMUA_Achr7G05680_001 Musa acuminata GSMUA_Achr7G05680_001 I
GSMUA_Achr7G12520_001 Musa acuminata GSMUA_Achr7G12520_001 I
GSMUA_Achr9G15640_001 Musa acuminata GSMUA_Achr9G15640_001 I
LPERR08G19430 Leersia perrieri LPERR08G19430 I
Lus10002296.g Linum usitatissimum Lus10002296.g I
Lus10004042.g Linum usitatissimum Lus10004042.g I
Lus10004043.g Linum usitatissimum Lus10004043.g I
Lus10024589.g Linum usitatissimum Lus10024589.g I
Lus10027197.g Linum usitatissimum Lus10027197.g I
Lus10032226.g Linum usitatissimum Lus10032226.g I
Lus10038913.g Linum usitatissimum Lus10038913.g I
MDP0000602739 Malus domestica MDP0000602739 I
MDP0000682032 Malus domestica MDP0000682032 I
MDP0000787808 Malus domestica MDP0000787808 I
mgf017719m Mimulus guttatus mgf017719m I
MLOC_14021 Hordeum vulgare MLOC_14021 I
MLOC_50944 Hordeum vulgare MLOC_50944 I
MTR_3g065440 Medicago truncatula MTR_3g065440 I
MTR_4g102380 Medicago truncatula MTR_4g102380 I
MTR_5g078140 Medicago truncatula MTR_5g078140 I
OB02G38450 Oryza brachyantha OB02G38450 I
OB06G19130 Oryza brachyantha OB06G19130 I
OB08G22860 Oryza brachyantha OB08G22860 I
OB08G29480 Oryza brachyantha OB08G29480 I
OB09G16260 Oryza brachyantha OB09G16260 I
OB09G24070 Oryza brachyantha OB09G24070 I
OGLUM02G32070 Oryza glumaepatula OGLUM02G32070 I
OLONG_005336 Oryza longistaminata OLONG_005336 I
OPUNC08G12780 Oryza punctata OPUNC08G12780 I
orange1.1g021498m.g Citrus sinensis orange1.1g021498m.g I
orange1.1g024441m.g Citrus sinensis orange1.1g024441m.g I
orange1.1g024849m.g Citrus sinensis orange1.1g024849m.g I
ORGLA02G0269000 Oryza glaberrima ORGLA02G0269000 I
ORGLA06G0093500 Oryza glaberrima ORGLA06G0093500 I
ORGLA08G0134400 Oryza glaberrima ORGLA08G0134400 I
ORGLA08G0217800 Oryza glaberrima ORGLA08G0217800 I
ORGLA09G0071400 Oryza glaberrima ORGLA09G0071400 I
ORGLA09G0137500 Oryza glaberrima ORGLA09G0137500 I
ORUFI02G33090 Oryza rufipogon ORUFI02G33090 I
ORUFI06G10280 Oryza rufipogon ORUFI06G10280 I
ORUFI08G25210 Oryza rufipogon ORUFI08G25210 I
ORUFI09G10320 Oryza rufipogon ORUFI09G10320 I
OS02G0732600 Oryza sativa OS02G0732600 I
OS06G0258000 Oryza sativa OS06G0258000 I
OS09G0401000 Oryza sativa OS09G0401000 I
OS09G0532900 Oryza sativa OS09G0532900 I
Pavir.Aa00435 Panicum virgatum Pavir.Aa00435 I
Pavir.Ab02913 Panicum virgatum Pavir.Ab02913 I
Pavir.Ba01239 Panicum virgatum Pavir.Ba01239 I
Pavir.Ba02148 Panicum virgatum Pavir.Ba02148 I
Pavir.Ba02149 Panicum virgatum Pavir.Ba02149 I
Pavir.Ba02150 Panicum virgatum Pavir.Ba02150 I
Pavir.Bb01872 Panicum virgatum Pavir.Bb01872 I
Pavir.Bb01873 Panicum virgatum Pavir.Bb01873 I
Pavir.Bb02654 Panicum virgatum Pavir.Bb02654 I
Pavir.Da01229 Panicum virgatum Pavir.Da01229 I
Pavir.Db01743 Panicum virgatum Pavir.Db01743 I
Pavir.Fa00850 Panicum virgatum Pavir.Fa00850 I
Pavir.Fb01563 Panicum virgatum Pavir.Fb01563 I
Pavir.Fb02321 Panicum virgatum Pavir.Fb02321 I
Pavir.J21364 Panicum virgatum Pavir.J21364 I
Pavir.J36915 Panicum virgatum Pavir.J36915 I
PDK_20s1306131g002 Phoenix dactylifera PDK_20s1306131g002 I
PGSC0003DMG400004780 Solanum tuberosum PGSC0003DMG400004780 I
PGSC0003DMG400015668 Solanum tuberosum PGSC0003DMG400015668 I
PK08857.1 Cannabis sativa PK08857.1 I
PK21166.1 Cannabis sativa PK21166.1 D
Pm013020 Prunus mume Pm013020 I
Pm019472 Prunus mume Pm019472 I
Pm023573 Prunus mume Pm023573 I
POPTR_0001s07830 Populus trichocarpa POPTR_0001s07830 I
POPTR_0003s11360 Populus trichocarpa POPTR_0003s11360 I
POPTR_0004s08480 Populus trichocarpa POPTR_0004s08480 I
POPTR_0012s14540 Populus trichocarpa POPTR_0012s14540 I
POPTR_0015s14600 Populus trichocarpa POPTR_0015s14600 I
POPTR_0017s02850 Populus trichocarpa POPTR_0017s02850 I
PRUPE_ppa009966mg Prunus persica PRUPE_ppa009966mg I
PRUPE_ppa011549mg Prunus persica PRUPE_ppa011549mg I
PRUPE_ppa021568mg Prunus persica PRUPE_ppa021568mg I
SapurV1A.0045s0090 Salix purpurea SapurV1A.0045s0090 I
SapurV1A.0102s0470 Salix purpurea SapurV1A.0102s0470 I
SapurV1A.0129s0270 Salix purpurea SapurV1A.0129s0270 I
SapurV1A.0367s0020 Salix purpurea SapurV1A.0367s0020 I
SapurV1A.0390s0060 Salix purpurea SapurV1A.0390s0060 I
SapurV1A.0456s0310 Salix purpurea SapurV1A.0456s0310 I
SapurV1A.0634s0020 Salix purpurea SapurV1A.0634s0020 I
SapurV1A.1318s0060 Salix purpurea SapurV1A.1318s0060 I
Sb02g024250 Sorghum bicolor Sb02g024250 I
Sb02g024260 Sorghum bicolor Sb02g024260 I
Sb02g030900 Sorghum bicolor Sb02g030900 I
Sb04g028850 Sorghum bicolor Sb04g028850 I
Sb07g024970 Sorghum bicolor Sb07g024970 I
Sb10g009330 Sorghum bicolor Sb10g009330 I
MYB20 Arabidopsis lyrata scaffold_201335.1 I
MYB43 Arabidopsis lyrata scaffold_601700.1 I
MYB99 Arabidopsis lyrata scaffold_802887.1 I
Si007017m.g Setaria italica Si007017m.g I
Si014144m.g Setaria italica Si014144m.g I
Si015412m.g Setaria italica Si015412m.g I
Si020225m.g Setaria italica Si020225m.g I
Si030711m.g Setaria italica Si030711m.g I
Si030750m.g Setaria italica Si030750m.g I
Si031939m.g Setaria italica Si031939m.g I
Si032544m.g Setaria italica Si032544m.g I
Solyc04g014470.2 Solanum lycopersicum Solyc04g014470.2 I
Solyc08g079270.2 Solanum lycopersicum Solyc08g079270.2 I
Solyc11g011050.1 Solanum lycopersicum Solyc11g011050.1 I
TCM_014956 Theobroma cacao TCM_014956 I
TCM_016054 Theobroma cacao TCM_016054 I
TCM_019116 Theobroma cacao TCM_019116 I
Thhalv10004868m.g Eutrema salsugineum Thhalv10004868m.g I
Thhalv10014086m.g Eutrema salsugineum Thhalv10014086m.g I
Thhalv10019852m.g Eutrema salsugineum Thhalv10019852m.g I
Thhalv10027281m.g Eutrema salsugineum Thhalv10027281m.g I
Thhalv10028864m.g Eutrema salsugineum Thhalv10028864m.g I
Traes_5BL_30D8E6BE2 Triticum aestivum Traes_5BL_30D8E6BE2 I
Traes_5BL_D85C0EF26 Triticum aestivum Traes_5BL_D85C0EF26 I
Traes_5DL_0B2C5ADF6 Triticum aestivum Traes_5DL_0B2C5ADF6 I
Traes_5DL_46D39C394 Triticum aestivum Traes_5DL_46D39C394 I
Traes_7DS_5100A9609 Triticum aestivum Traes_7DS_5100A9609 I
TRIUR3_16495 Triticum urartu TRIUR3_16495 I
VIT_00s1241g00010 Vitis vinifera VIT_00s1241g00010 I
MYB43 Vitis vinifera VIT_14s0006g00450 I
VIT_16s0022g01210 Vitis vinifera VIT_16s0022g01210 I