CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400009096
(
Solanum tuberosum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
PGSC0003DMG400009096
T027240_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400023490
BED ZF
6
51
DVCWEYAEKLDGNKVRCKFCLRILNGGISRLKHHLSRLPSKGVNPC
Links
Other
BED ZF
family TFs
Other
Solanum tuberosum
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G57970
Brachypodium distachyon
BRADI1G57970
N
0.000
BRADI2G60331
Brachypodium distachyon
BRADI2G60331
N
0.000
BRADI2G61630
Brachypodium distachyon
BRADI2G61630
N
0.000
BRADI3G57360
Brachypodium distachyon
BRADI3G57360
I
0.000
BRADI4G35580
Brachypodium distachyon
BRADI4G35580
I
0.000
BRADI4G35590
Brachypodium distachyon
BRADI4G35590
N
0.000
BRADI4G35610
Brachypodium distachyon
BRADI4G35610
I
0.000
BRADI4G35620
Brachypodium distachyon
BRADI4G35620
I
0.000
GRMZM2G069082
Zea mays
GRMZM2G069082
I
0.000
GRMZM2G124037
Zea mays
GRMZM2G124037
I
0.000
Q8GZQ2_MAIZE
Zea mays
Q8GZQ2_MAIZE
D
0.000
Sb02g030310
Sorghum bicolor
Sb02g030310
I
0.000