CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra010635
(
Brassica rapa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Bra010635
T031397_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra010635.1-P
bHLH
63
112
AAKKHSDAERRRRLRINYQFEALRTILPNLIKQDKASVLGETVRYFKELK
Links
Other
bHLH
family TFs
Other
Brassica rapa
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0007_233
Arabidopsis lyrata
Al_scaffold_0007_233
N
0.894
AMTR_s00002p00019320
Amborella trichopoda
AMTR_s00002p00019320
I
0.842
Aquca_007_00571
Aquilegia coerulea
Aquca_007_00571
N
0.842
BHLH131
Arabidopsis thaliana
AT4G38070
N
0.894
Bo3g152990
Brassica oleracea
Bo3g152990
N
0.889
Bostr.25542s0212
Boechera stricta
Bostr.25542s0212
N
0.894
Cagra.5414s0046
Capsella grandiflora
Cagra.5414s0046
N
0.894
Carubv10003996m.g
Capsella rubella
Carubv10003996m.g
N
0.894
Ca_14981
Cicer arietinum
Ca_14981
N
0.842
evm.TU.supercontig_55.51
Carica papaya
evm.TU.supercontig_55.51
N
0.846
gene20797-v1.0-hybrid
Fragaria vesca
gene20797-v1.0-hybrid
N
0.845
Gorai.007G059100
Gossypium raimondii
Gorai.007G059100
N
0.857
Gorai.009G230000
Gossypium raimondii
Gorai.009G230000
N
0.854
MTR_5g066080
Medicago truncatula
MTR_5g066080
N
0.842
Pavir.Ba01821
Panicum virgatum
Pavir.Ba01821
N
0.842
Pavir.Bb02155
Panicum virgatum
Pavir.Bb02155
N
0.842
PGSC0003DMG400023577
Solanum tuberosum
PGSC0003DMG400023577
N
0.842
Pm002160
Prunus mume
Pm002160
N
0.845
PRUPE_ppa019545mg
Prunus persica
PRUPE_ppa019545mg
N
0.845
Solyc04g014360.2
Solanum lycopersicum
Solyc04g014360.2
N
0.842
Thhalv10017944m.g
Eutrema salsugineum
Thhalv10017944m.g
N
0.855
Thhalv10027500m.g
Eutrema salsugineum
Thhalv10027500m.g
N
0.894