CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_55.51
(
Carica papaya
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
evm.TU.supercontig_55.51
T049781_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_55.51
bHLH
53
102
AAKKHSEAERRRRFRINSQFAALRTILPNLTKMDKASVLGEAIQQVTQLK
Links
Other
bHLH
family TFs
Other
Carica papaya
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene20797-v1.0-hybrid
Fragaria vesca
gene20797-v1.0-hybrid
N
0.867
BHLH131
Arabidopsis thaliana
AT4G38070
N
0.866
Thhalv10027500m.g
Eutrema salsugineum
Thhalv10027500m.g
N
0.866
Al_scaffold_0007_233
Arabidopsis lyrata
Al_scaffold_0007_233
N
0.866
TRIUR3_31897
Triticum urartu
TRIUR3_31897
I
0.862
MLOC_66385
Hordeum vulgare
MLOC_66385
I
0.862
Traes_4DL_7BD3165FB
Triticum aestivum
Traes_4DL_7BD3165FB
I
0.862
F775_10096
Aegilops tauschii
F775_10096
I
0.862
Si013911m.g
Setaria italica
Si013911m.g
I
0.862
Sb07g021170
Sorghum bicolor
Sb07g021170
I
0.862
Traes_4AS_DD16F89E7
Triticum aestivum
Traes_4AS_DD16F89E7
I
0.862
Traes_4BL_A2B32FCEE
Triticum aestivum
Traes_4BL_A2B32FCEE
I
0.862
GRMZM2G526668
Zea mays
GRMZM2G526668
I
0.862
Gorai.007G059100
Gossypium raimondii
Gorai.007G059100
N
0.858
TCM_000997
Theobroma cacao
TCM_000997
N
0.858
PK25264.1
Cannabis sativa
PK25264.1
N
0.854
Pm002160
Prunus mume
Pm002160
N
0.847
PRUPE_ppa019545mg
Prunus persica
PRUPE_ppa019545mg
N
0.847
Cagra.5414s0046
Capsella grandiflora
Cagra.5414s0046
N
0.846
Bostr.25542s0212
Boechera stricta
Bostr.25542s0212
N
0.846
Carubv10003996m.g
Capsella rubella
Carubv10003996m.g
N
0.846
Bra010635
Brassica rapa
Bra010635
N
0.846
Ca_18110
Cicer arietinum
Ca_18110
N
0.845
GLYMA01G02930
Glycine max
GLYMA01G02930
N
0.845
Aquca_081_00012
Aquilegia coerulea
Aquca_081_00012
I
0.843
Si039730m.g
Setaria italica
Si039730m.g
I
0.842
Solyc05g009880.2
Solanum lycopersicum
Solyc05g009880.2
I
0.842
Thhalv10004524m.g
Eutrema salsugineum
Thhalv10004524m.g
I
0.842
Solyc04g006990.2
Solanum lycopersicum
Solyc04g006990.2
I
0.842
SELMODRAFT_412681
Selaginella moellendorffii
SELMODRAFT_412681
I
0.842
chr2.CM0749.390.nc
Lotus japonicus
chr2.CM0749.390.nc
I
0.842
PGSC0003DMG400000824
Solanum tuberosum
PGSC0003DMG400000824
I
0.842
Sb01g040450
Sorghum bicolor
Sb01g040450
I
0.842
Pavir.Ib01099
Panicum virgatum
Pavir.Ib01099
I
0.842
SELMODRAFT_417246
Selaginella moellendorffii
SELMODRAFT_417246
I
0.842
Thhalv10018758m.g
Eutrema salsugineum
Thhalv10018758m.g
I
0.842
Cla000223
Citrullus lanatus
Cla000223
I
0.842
Cagra.1157s0003
Capsella grandiflora
Cagra.1157s0003
I
0.842
Cagra.0417s0002
Capsella grandiflora
Cagra.0417s0002
I
0.842
Carubv10017470m.g
Capsella rubella
Carubv10017470m.g
I
0.842
Carubv10020515m.g
Capsella rubella
Carubv10020515m.g
I
0.842
Lus10034271.g
Linum usitatissimum
Lus10034271.g
I
0.842
OS09G0410700
Oryza sativa
OS09G0410700
I
0.842
Bostr.26959s0001
Boechera stricta
Bostr.26959s0001
I
0.842
Ca_24775
Cicer arietinum
Ca_24775
I
0.842
Pavir.Ba01821
Panicum virgatum
Pavir.Ba01821
N
0.842
Gorai.009G230000
Gossypium raimondii
Gorai.009G230000
N
0.842
Lus10041493.g
Linum usitatissimum
Lus10041493.g
I
0.842
Bostr.0556s0241
Boechera stricta
Bostr.0556s0241
I
0.842
Pavir.Bb02155
Panicum virgatum
Pavir.Bb02155
N
0.842
ORUFI09G10670
Oryza rufipogon
ORUFI09G10670
I
0.842
BHLH32
Arabidopsis lyrata
fgenesh2_kg.5__324__AT3G25710.1
I
0.842
fgenesh2_kg.2__1138__AT1G68810.1
Arabidopsis lyrata
fgenesh2_kg.2__1138__AT1G68810.1
I
0.842
BRADI1G67500
Brachypodium distachyon
BRADI1G67500
I
0.842
Bra026510
Brassica rapa
Bra026510
I
0.842
GLYMA01G22530
Glycine max
GLYMA01G22530
I
0.842
GLYMA02G11190
Glycine max
GLYMA02G11190
I
0.842
OS08G0432800
Oryza sativa
OS08G0432800
I
0.842
GRMZM2G107276
Zea mays
GRMZM2G107276
I
0.842
GRMZM2G043854
Zea mays
GRMZM2G043854
I
0.842
Bra025158
Brassica rapa
Bra025158
I
0.842
Bra004338
Brassica rapa
Bra004338
I
0.842
BGIOSGA026937
Oryza indica
BGIOSGA026937
I
0.842
BHLH32
Arabidopsis thaliana
AT3G25710
I
0.842
BHLH30
Arabidopsis thaliana
AT1G68810
I
0.842
AMTR_s00010p00144270
Amborella trichopoda
AMTR_s00010p00144270
I
0.842
BGIOSGA029777
Oryza indica
BGIOSGA029777
I
0.842
Bo2g138630
Brassica oleracea
Bo2g138630
I
0.842
Bra004015
Brassica rapa
Bra004015
I
0.842
Bo7g081980
Brassica oleracea
Bo7g081980
I
0.842
Bo6g108270
Brassica oleracea
Bo6g108270
I
0.842
GSMUA_Achr7G07280_001
Musa acuminata
GSMUA_Achr7G07280_001
I
0.842
GSMUA_Achr6G30610_001
Musa acuminata
GSMUA_Achr6G30610_001
I
0.842
OPUNC08G13730
Oryza punctata
OPUNC08G13730
I
0.842
ONIVA09G09550
Oryza nivara
ONIVA09G09550
I
0.842
ONIVA08G16750
Oryza nivara
ONIVA08G16750
I
0.842
ONIVA03G12280
Oryza nivara
ONIVA03G12280
I
0.842
ORGLA03G0109100
Oryza glaberrima
ORGLA03G0109100
I
0.842
ORGLA08G0137400
Oryza glaberrima
ORGLA08G0137400
I
0.842
OS03G0260600
Oryza sativa
OS03G0260600
I
0.842
ORUFI08G17560
Oryza rufipogon
ORUFI08G17560
I
0.842
ORUFI03G11650
Oryza rufipogon
ORUFI03G11650
I
0.842
LPERR03G10060
Leersia perrieri
LPERR03G10060
I
0.842
OMERI09G07780
Oryza meridionalis
OMERI09G07780
I
0.842
OBART03G11320
Oryza barthii
OBART03G11320
I
0.842
OB03G21490
Oryza brachyantha
OB03G21490
I
0.842
LPERR09G06880
Leersia perrieri
LPERR09G06880
I
0.842
LPERR08G12910
Leersia perrieri
LPERR08G12910
I
0.842
OBART08G15650
Oryza barthii
OBART08G15650
I
0.842
OGLUM03G11280
Oryza glumaepatula
OGLUM03G11280
I
0.842
OGLUM08G16400
Oryza glumaepatula
OGLUM08G16400
I
0.842
OMERI08G12930
Oryza meridionalis
OMERI08G12930
I
0.842
OLONG_004075
Oryza longistaminata
OLONG_004075
I
0.842
SapurV1A.0166s0040
Salix purpurea
SapurV1A.0166s0040
N
0.841
Ciclev10020323m.g
Citrus clementina
Ciclev10020323m.g
I
0.840
orange1.1g026943m.g
Citrus sinensis
orange1.1g026943m.g
I
0.840