TFEC (Loxodonta africana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLAFG00000017267 T034948_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFEC
M02778_2.00 		Homo sapiens
RNCACRTGAB
VTCAYGTGNY		 SELEX
Jolma et al.(2013)
TFEC_1 		0.884 0.981
TFEC
M04078_2.00 		Homo sapiens
NVCACGTGACN
NGTCACGTGBN		 SELEX
Yin et al.(2017)
TFEC_eDBD_HT-SELEX 		0.884 0.981
TFEC
M04079_2.00 		Homo sapiens
VNCATGTGAYN
NRTCACATGNB		 SELEX
Yin et al.(2017)
TFEC_eDBD_Methyl-HT-SELEX 		0.884 0.981
Tfec
M00755_2.00 		Mus musculus
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2013)
pTH2885 		0.884 0.963
Tfec
M01736_2.00 		Mus musculus
NCNCRTGVYN
NRBCAYGNGN		 PBM
Weirauch et al.(2014)
pTH5065 		0.884 0.963
Mitf
M01741_2.00 		Mus musculus
NCDCGTGAYN
NRTCACGHGN		 PBM
Weirauch et al.(2014)
pTH5465 		0.840 0.889
MITF
M08058_2.00 		Homo sapiens
NNNDRTCACGTGAYHNNN
NNNDRTCACGTGAYHNNN		 ChIP-seq
Mathelier et al.(2014)
MA0620.2 		0.840 0.889
MITF
M08740_2.00 		Homo sapiens
YCAYGTGACH
DGTCACRTGR		 Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A 		0.840 0.889
Mitf
M08765_2.00 		Mus musculus
BCHYGTGACY
RGTCACRDGV		 Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A 		0.840 0.889
Mitf
M09475_2.00 		Mus musculus
GTCACRWGVB
VBCWYGTGAC		 Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085 		0.840 0.889
MITF
M09880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q4 		0.840 0.889
MITF
M09881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q6 		0.840 0.889
Tfe3
M01715_2.00 		Mus musculus
NCDCRTGAYN
NRTCAYGHGN		 PBM
Weirauch et al.(2014)
pTH5057 		0.840 0.870
Tfe3
M05833_2.00 		Mus musculus
CACGTGAY
RTCACGTG		 SMiLE-seq
Isakova et al.(2017)
TFE3 		0.840 0.870
Tfe3
M08743_2.00 		Mus musculus
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A 		0.840 0.870
Tfe3
M09884_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_01 		0.840 0.870
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000014473 bHLH 52 105

Links

Other bHLH family TFs
Other Loxodonta africana TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000161801 Angiostrongylus cantonensis ACAC_0000161801 N
ACOC_0000165301 Angiostrongylus costaricensis ACOC_0000165301 N
ALUE_0000981201 Ascaris lumbricoides ALUE_0000981201 N
ANCCEY_06495 Ancylostoma ceylanicum ANCCEY_06495 N
ANCDUO_13479 Ancylostoma duodenale ANCDUO_13479 N
ASIM_0001432701 Anisakis simplex ASIM_0001432701 N
ASU_03242 Ascaris suum ASU_03242 N
Bm3947 Brugia malayi Bm3947 N
BTMF_0000795401 Brugia timori BTMF_0000795401 N
DICVIV_11308 Dictyocaulus viviparus DICVIV_11308 N
DME_0000578001 Dracunculus medinensis DME_0000578001 N
EEL_0000453801 Elaeophora elaphi EEL_0000453801 N
Hba_19518 Heterorhabditis bacteriophora Hba_19518 N
HCOI00597600 Haemonchus contortus HCOI00597600 N
HPBE_0000675601 Heligmosomoides bakeri HPBE_0000675601 N
HPLM_0001056701 Haemonchus placei HPLM_0001056701 N
LOAG_02128 Loa loa LOAG_02128 N
OESDEN_02210 Oesophagostomum dentatum OESDEN_02210 N
OFLC_0000425901 Onchocerca flexuosa OFLC_0000425901 N
Ppa-tlf-1 Pristionchus pacificus PPA12059 N
scaffold259-EXSNAP2012.8 Pristionchus exspectatus scaffold259-EXSNAP2012.8 N
TCLT_0000474901 Thelazia callipaeda TCLT_0000474901 N
tlf-1 Caenorhabditis elegans WBGene00006577 N
WBGene00238395 Onchocerca volvulus WBGene00238395 N
WUBG_01280 Wuchereria bancrofti WUBG_01280 N