ENSSSCG00000011534 (Sus scrofa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSSCG00000011534 T037424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 1.000
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 1.000
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 1.000
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 1.000
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 1.000
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 1.000
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 1.000
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 1.000
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 1.000
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 1.000
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 1.000
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 1.000
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 1.000
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 1.000
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 0.981
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 0.981
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 0.981
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 0.981
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 0.981
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 0.981
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000012294 bHLH 54 108

Links

Other bHLH family TFs
Other Sus scrofa TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g129970 Brassica oleracea Bo1g129970 N 0.000
Bo9g044150 Brassica oleracea Bo9g044150 N 0.000
Bostr.28625s0227 Boechera stricta Bostr.28625s0227 N 0.000
Cagra.0007s0024 Capsella grandiflora Cagra.0007s0024 N 0.000
Carubv10013145m.g Capsella rubella Carubv10013145m.g N 0.000
cassava7664.valid.m1 Manihot esculenta cassava7664.valid.m1 N 0.000
cassava7665.valid.m1 Manihot esculenta cassava7665.valid.m1 N 0.000
Cucsa.057910 Cucumis sativus Cucsa.057910 N 0.000
gene27341-v1.0-hybrid Fragaria vesca gene27341-v1.0-hybrid N 0.000
GLYMA09G15135 Glycine max GLYMA09G15135 N 0.000
GLYMA15G27362 Glycine max GLYMA15G27362 N 0.000
Gorai.004G271300 Gossypium raimondii Gorai.004G271300 N 0.000
Gorai.007G331900 Gossypium raimondii Gorai.007G331900 N 0.000
Lus10005558.g Linum usitatissimum Lus10005558.g N 0.000
PGSC0003DMG400021296 Solanum tuberosum PGSC0003DMG400021296 N 0.000
PK12364.1 Cannabis sativa PK12364.1 N 0.000
Pm011252 Prunus mume Pm011252 N 0.000
POPTR_0001s39240 Populus trichocarpa POPTR_0001s39240 N 0.000
POPTR_0011s10500 Populus trichocarpa POPTR_0011s10500 N 0.000
SapurV1A.0020s0660 Salix purpurea SapurV1A.0020s0660 N 0.000
SapurV1A.0026s0130 Salix purpurea SapurV1A.0026s0130 N 0.000
Solyc10g007470.2 Solanum lycopersicum Solyc10g007470.2 N 0.000
TCM_032128 Theobroma cacao TCM_032128 N 0.000
Thhalv10020233m.g Eutrema salsugineum Thhalv10020233m.g N 0.000
VIT_19s0014g00320 Vitis vinifera VIT_19s0014g00320 N 0.000