Traes_6DL_D38F3257B (Triticum aestivum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Traes_6DL_D38F3257B T045792_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.876 0.824
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.876 0.824
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.876 0.824
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.876 0.824
BIM2
M01701_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8089 		0.856 0.706
BIM2
M06727_2.00 		Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_colamp 		0.856 0.706
BIM2
M06728_2.00 		Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_col_v3b 		0.856 0.706
fgenesh1_pg.scaffold_37000071
M01757_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8584 		0.846 0.824
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.843 0.490
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_6DL_D38F3257B.2 bHLH 62 112

Links

Other bHLH family TFs
Other Triticum aestivum TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29739.m003684 Ricinus communis 29739.m003684 I 0.843
30174.m008814 Ricinus communis 30174.m008814 I 0.843
AMTR_s00006p00250310 Amborella trichopoda AMTR_s00006p00250310 I 0.846
AMTR_s00129p00124210 Amborella trichopoda AMTR_s00129p00124210 I 0.843
Aquca_002_00952 Aquilegia coerulea Aquca_002_00952 I 0.846
Aquca_020_00579 Aquilegia coerulea Aquca_020_00579 I 0.843
Aquca_035_00175 Aquilegia coerulea Aquca_035_00175 I 0.843
BIM2 Arabidopsis thaliana AT1G69010 D 0.856
UNE10 Arabidopsis thaliana AT4G00050 D 0.843
BIM1 Arabidopsis thaliana AT5G08130 D 0.876
ALC Arabidopsis thaliana AT5G67110 I 0.840
BGIOSGA005697 Oryza indica BGIOSGA005697 I 0.884
BGIOSGA006236 Oryza indica BGIOSGA006236 I 0.851
BGIOSGA021743 Oryza indica BGIOSGA021743 I 0.843
BGIOSGA022375 Oryza indica BGIOSGA022375 I 0.840
BGIOSGA028888 Oryza indica BGIOSGA028888 I 0.848
Bo2g062560 Brassica oleracea Bo2g062560 I 0.856
Bo2g161110 Brassica oleracea Bo2g161110 I 0.876
Bo3g004690 Brassica oleracea Bo3g004690 I 0.876
Bo3g042120 Brassica oleracea Bo3g042120 I 0.843
Bo3g054850 Brassica oleracea Bo3g054850 I 0.843
Bo5g020460 Brassica oleracea Bo5g020460 I 0.876
Bo6g108530 Brassica oleracea Bo6g108530 I 0.856
Bo9g174770 Brassica oleracea Bo9g174770 I 0.876
Bostr.0568s0133 Boechera stricta Bostr.0568s0133 I 0.840
Bostr.10273s0468 Boechera stricta Bostr.10273s0468 I 0.856
Bostr.13129s0152 Boechera stricta Bostr.13129s0152 I 0.876
Bostr.14547s0014 Boechera stricta Bostr.14547s0014 I 0.843
Bra000560 Brassica rapa Bra000560 I 0.843
Bra004355 Brassica rapa Bra004355 I 0.856
Bra005969 Brassica rapa Bra005969 I 0.876
Bra009322 Brassica rapa Bra009322 I 0.876
Bra012133 Brassica rapa Bra012133 I 0.840
Bra029354 Brassica rapa Bra029354 I 0.876
Bra037312 Brassica rapa Bra037312 I 0.843
Bra038332 Brassica rapa Bra038332 I 0.856
BRADI3G38970 Brachypodium distachyon BRADI3G38970 I 0.848
BRADI3G46200 Brachypodium distachyon BRADI3G46200 I 0.863
BRADI3G56340 Brachypodium distachyon BRADI3G56340 I 0.914
Cagra.1157s0023 Capsella grandiflora Cagra.1157s0023 I 0.856
Cagra.1365s0019 Capsella grandiflora Cagra.1365s0019 I 0.876
Cagra.20893s0010 Capsella grandiflora Cagra.20893s0010 I 0.843
Carubv10000655m.g Capsella rubella Carubv10000655m.g I 0.876
Carubv10001567m.g Capsella rubella Carubv10001567m.g I 0.843
Carubv10020679m.g Capsella rubella Carubv10020679m.g I 0.856
Carubv10028570m.g Capsella rubella Carubv10028570m.g I 0.840
cassava10497.m1 Manihot esculenta cassava10497.m1 I 0.843
cassava13956.valid.m1 Manihot esculenta cassava13956.valid.m1 I 0.843
cassava19894.m1 Manihot esculenta cassava19894.m1 I 0.843
cassava29318.valid.m1 Manihot esculenta cassava29318.valid.m1 I 0.846
cassava43379.valid.m1 Manihot esculenta cassava43379.valid.m1 I 0.846
Ca_19269 Cicer arietinum Ca_19269 I 0.840
Ca_22883 Cicer arietinum Ca_22883 I 0.843
Ciclev10008008m.g Citrus clementina Ciclev10008008m.g I 0.843
Ciclev10019786m.g Citrus clementina Ciclev10019786m.g I 0.840
Ciclev10020053m.g Citrus clementina Ciclev10020053m.g I 0.843
Ciclev10020248m.g Citrus clementina Ciclev10020248m.g I 0.846
Cla018818 Citrullus lanatus Cla018818 I 0.858
Cucsa.113490 Cucumis sativus Cucsa.113490 I 0.846
estExt_fgenesh1_pg.C_2110039 Physcomitrella patens estExt_fgenesh1_pg.C_2110039 I 0.846
Eucgr.B00645 Eucalyptus grandis Eucgr.B00645 I 0.876
Eucgr.B03113 Eucalyptus grandis Eucgr.B03113 I 0.856
Eucgr.D02499 Eucalyptus grandis Eucgr.D02499 I 0.843
evm.TU.supercontig_212.3 Carica papaya evm.TU.supercontig_212.3 I 0.843
evm.TU.supercontig_3.225 Carica papaya evm.TU.supercontig_3.225 I 0.846
evm.TU.supercontig_82.59 Carica papaya evm.TU.supercontig_82.59 I 0.843
e_gw1.167.42.1 Physcomitrella patens e_gw1.167.42.1 I 0.841
fgenesh1_pg.scaffold_37000071 Physcomitrella patens fgenesh1_pg.scaffold_37000071 D 0.846
BIM2 Arabidopsis lyrata fgenesh2_kg.2__1159__AT1G69010.1 I 0.856
ALC Arabidopsis lyrata fgenesh2_kg.8__2705__AT5G67110.1 I 0.840
gene09125-v1.0-hybrid Fragaria vesca gene09125-v1.0-hybrid I 0.840
gene25546-v1.0-hybrid Fragaria vesca gene25546-v1.0-hybrid I 0.843
gene26139-v1.0-hybrid Fragaria vesca gene26139-v1.0-hybrid I 0.850
GLYMA01G15930 Glycine max GLYMA01G15930 I 0.843
GLYMA01G32890 Glycine max GLYMA01G32890 I 0.843
GLYMA03G04000 Glycine max GLYMA03G04000 I 0.843
GLYMA05G07490 Glycine max GLYMA05G07490 I 0.846
GLYMA11G17120 Glycine max GLYMA11G17120 I 0.843
Gorai.001G148300 Gossypium raimondii Gorai.001G148300 I 0.840
Gorai.006G269200 Gossypium raimondii Gorai.006G269200 I 0.863
Gorai.007G040600 Gossypium raimondii Gorai.007G040600 I 0.856
Gorai.007G088300 Gossypium raimondii Gorai.007G088300 I 0.843
Gorai.007G118100 Gossypium raimondii Gorai.007G118100 I 0.840
Gorai.008G106900 Gossypium raimondii Gorai.008G106900 I 0.843
Gorai.009G038500 Gossypium raimondii Gorai.009G038500 I 0.843
Gorai.009G327300 Gossypium raimondii Gorai.009G327300 I 0.856
Gorai.013G098000 Gossypium raimondii Gorai.013G098000 I 0.856
GRMZM2G017349 Zea mays GRMZM2G017349 I 0.840
GRMZM2G024530 Zea mays GRMZM2G024530 I 0.863
GRMZM2G116785 Zea mays GRMZM2G116785 I 0.863
GRMZM2G317450 Zea mays GRMZM2G317450 I 0.884
GRMZM5G839518 Zea mays GRMZM5G839518 I 0.850
GSMUA_Achr2G05450_001 Musa acuminata GSMUA_Achr2G05450_001 I 0.846
GSMUA_Achr3G10640_001 Musa acuminata GSMUA_Achr3G10640_001 I 0.870
GSMUA_Achr4G19530_001 Musa acuminata GSMUA_Achr4G19530_001 I 0.846
GSMUA_Achr9G19110_001 Musa acuminata GSMUA_Achr9G19110_001 I 0.846
gw1.90.123.1 Physcomitrella patens gw1.90.123.1 I 0.846
LPERR06G03910 Leersia perrieri LPERR06G03910 I 0.840
LPERR06G05570 Leersia perrieri LPERR06G05570 I 0.843
MDP0000439540 Malus domestica MDP0000439540 I 0.843
mgf001137m Mimulus guttatus mgf001137m I 0.876
mgf005431m Mimulus guttatus mgf005431m I 0.843
mgf005849m Mimulus guttatus mgf005849m I 0.876
mgf011829m Mimulus guttatus mgf011829m I 0.856
MLOC_62335 Hordeum vulgare MLOC_62335 I 0.914
MTR_1g019240 Medicago truncatula MTR_1g019240 I 0.851
MTR_4g110040 Medicago truncatula MTR_4g110040 I 0.846
OB02G28530 Oryza brachyantha OB02G28530 I 0.851
OB02G38020 Oryza brachyantha OB02G38020 I 0.884
OB08G25940 Oryza brachyantha OB08G25940 I 0.848
OBART02G20940 Oryza barthii OBART02G20940 I 0.851
OBART06G04330 Oryza barthii OBART06G04330 I 0.840
OBART06G06000 Oryza barthii OBART06G06000 I 0.843
OGLUM02G21200 Oryza glumaepatula OGLUM02G21200 I 0.851
OGLUM06G04430 Oryza glumaepatula OGLUM06G04430 I 0.840
OGLUM06G06280 Oryza glumaepatula OGLUM06G06280 I 0.843
OGLUM08G19830 Oryza glumaepatula OGLUM08G19830 I 0.848
OLONG_003583 Oryza longistaminata OLONG_003583 I 0.848
OLONG_013313 Oryza longistaminata OLONG_013313 I 0.843
OLONG_025501 Oryza longistaminata OLONG_025501 I 0.851
OMERI02G20700 Oryza meridionalis OMERI02G20700 I 0.851
OMERI06G05430 Oryza meridionalis OMERI06G05430 I 0.840
OMERI06G07190 Oryza meridionalis OMERI06G07190 I 0.843
ONIVA02G23040 Oryza nivara ONIVA02G23040 I 0.851
ONIVA06G05510 Oryza nivara ONIVA06G05510 I 0.840
ONIVA06G06960 Oryza nivara ONIVA06G06960 I 0.843
ONIVA08G20800 Oryza nivara ONIVA08G20800 I 0.848
OPUNC02G18940 Oryza punctata OPUNC02G18940 I 0.851
OPUNC06G05770 Oryza punctata OPUNC06G05770 I 0.843
OPUNC08G16820 Oryza punctata OPUNC08G16820 I 0.848
orange1.1g010045m.g Citrus sinensis orange1.1g010045m.g I 0.843
orange1.1g012387m.g Citrus sinensis orange1.1g012387m.g I 0.843
orange1.1g038097m.g Citrus sinensis orange1.1g038097m.g I 0.840
orange1.1g038451m.g Citrus sinensis orange1.1g038451m.g I 0.846
ORGLA02G0180000 Oryza glaberrima ORGLA02G0180000 I 0.851
ORGLA02G0264700 Oryza glaberrima ORGLA02G0264700 I 0.884
ORGLA06G0039900 Oryza glaberrima ORGLA06G0039900 I 0.840
ORGLA08G0164200 Oryza glaberrima ORGLA08G0164200 I 0.848
ORUFI02G21960 Oryza rufipogon ORUFI02G21960 I 0.851
ORUFI06G04330 Oryza rufipogon ORUFI06G04330 I 0.840
ORUFI06G06220 Oryza rufipogon ORUFI06G06220 I 0.843
ORUFI08G21030 Oryza rufipogon ORUFI08G21030 I 0.848
OS02G0564700 Oryza sativa OS02G0564700 I 0.851
OS02G0726700 Oryza sativa OS02G0726700 I 0.884
OS06G0193400 Oryza sativa OS06G0193400 I 0.843
OS08G0490000 Oryza sativa OS08G0490000 I 0.848
Pavir.Aa00700 Panicum virgatum Pavir.Aa00700 I 0.884
Pavir.Aa01634 Panicum virgatum Pavir.Aa01634 I 0.850
Pavir.Ab02747 Panicum virgatum Pavir.Ab02747 I 0.850
Pavir.Ab03017 Panicum virgatum Pavir.Ab03017 I 0.884
Pavir.Db01966 Panicum virgatum Pavir.Db01966 I 0.863
Pavir.Fb01833 Panicum virgatum Pavir.Fb01833 I 0.848
Pavir.J15280 Panicum virgatum Pavir.J15280 I 0.863
Pavir.J15575 Panicum virgatum Pavir.J15575 I 0.840
Pavir.J38250 Panicum virgatum Pavir.J38250 I 0.840
Pavir.J38910 Panicum virgatum Pavir.J38910 I 0.848
PGSC0003DMG400025976 Solanum tuberosum PGSC0003DMG400025976 I 0.843
PGSC0003DMG401007955 Solanum tuberosum PGSC0003DMG401007955 I 0.851
PK08539.1 Cannabis sativa PK08539.1 I 0.845
PK10562.1 Cannabis sativa PK10562.1 I 0.876
PK20816.1 Cannabis sativa PK20816.1 I 0.843
POPTR_0002s14430 Populus trichocarpa POPTR_0002s14430 I 0.843
POPTR_0006s13790 Populus trichocarpa POPTR_0006s13790 I 0.843
POPTR_0015s03550 Populus trichocarpa POPTR_0015s03550 I 0.846
PRUPE_ppa003436mg Prunus persica PRUPE_ppa003436mg I 0.846
PRUPE_ppa005629mg Prunus persica PRUPE_ppa005629mg I 0.843
SapurV1A.0033s0400 Salix purpurea SapurV1A.0033s0400 I 0.843
SapurV1A.0178s0150 Salix purpurea SapurV1A.0178s0150 I 0.846
SapurV1A.0249s0140 Salix purpurea SapurV1A.0249s0140 I 0.843
SapurV1A.0321s0050 Salix purpurea SapurV1A.0321s0050 I 0.840
SapurV1A.0868s0010 Salix purpurea SapurV1A.0868s0010 I 0.846
Sb04g023320 Sorghum bicolor Sb04g023320 I 0.850
Sb04g029270 Sorghum bicolor Sb04g029270 I 0.884
Sb07g028860 Sorghum bicolor Sb07g028860 I 0.848
Sb10g004500 Sorghum bicolor Sb10g004500 I 0.840
Sb10g006250 Sorghum bicolor Sb10g006250 I 0.863
BIM1 Arabidopsis lyrata scaffold_600819.1 I 0.876
UNE10 Arabidopsis lyrata scaffold_604304.1 I 0.843
SELMODRAFT_425336 Selaginella moellendorffii SELMODRAFT_425336 I 0.843
SELMODRAFT_451475 Selaginella moellendorffii SELMODRAFT_451475 I 0.848
SELMODRAFT_451477 Selaginella moellendorffii SELMODRAFT_451477 I 0.848
Si006332m.g Setaria italica Si006332m.g I 0.863
Si013622m.g Setaria italica Si013622m.g I 0.848
Si016505m.g Setaria italica Si016505m.g I 0.884
Si016939m.g Setaria italica Si016939m.g I 0.850
Solyc01g090790.2 Solanum lycopersicum Solyc01g090790.2 I 0.843
Solyc03g114720.2 Solanum lycopersicum Solyc03g114720.2 I 0.876
Solyc06g069370.2 Solanum lycopersicum Solyc06g069370.2 I 0.846
TCM_004959 Theobroma cacao TCM_004959 I 0.840
TCM_005607 Theobroma cacao TCM_005607 I 0.843
TCM_011433 Theobroma cacao TCM_011433 I 0.856
TCM_014392 Theobroma cacao TCM_014392 I 0.846
TCM_037455 Theobroma cacao TCM_037455 I 0.843
Thhalv10004889m.g Eutrema salsugineum Thhalv10004889m.g I 0.840
Thhalv10013181m.g Eutrema salsugineum Thhalv10013181m.g I 0.876
Thhalv10018889m.g Eutrema salsugineum Thhalv10018889m.g I 0.856
Thhalv10028687m.g Eutrema salsugineum Thhalv10028687m.g I 0.843
Traes_6BL_DA93728B3 Triticum aestivum Traes_6BL_DA93728B3 I 0.914
VIT_11s0016g00380 Vitis vinifera VIT_11s0016g00380 I 0.843
UNE10 Vitis vinifera VIT_15s0021g02690 I 0.843
BIM1 Vitis vinifera VIT_17s0000g04790 I 0.846