Aquca_006_00387 (Aquilegia coerulea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Aquca_006_00387 T048973_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BIM2
M01701_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8089 		0.858 0.804
BIM2
M06727_2.00 		Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_colamp 		0.858 0.804
BIM2
M06728_2.00 		Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_col_v3b 		0.858 0.804
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_006_00387.1 bHLH 50 100
Aquca_006_00387.2 bHLH 48 98
Aquca_006_00387.3 bHLH 50 100
Aquca_006_00387.4 bHLH 50 100
Aquca_006_00387.5 bHLH 50 100

Links

Other bHLH family TFs
Other Aquilegia coerulea TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29790.m000843 Ricinus communis 29790.m000843 I 0.858
30138.m003899 Ricinus communis 30138.m003899 I 0.858
30138.m003913 Ricinus communis 30138.m003913 I 0.861
BIM2 Arabidopsis thaliana AT1G69010 D 0.858
BGIOSGA028888 Oryza indica BGIOSGA028888 I 0.840
Bo2g062560 Brassica oleracea Bo2g062560 I 0.858
Bo6g108530 Brassica oleracea Bo6g108530 I 0.858
Bostr.10273s0468 Boechera stricta Bostr.10273s0468 I 0.858
Bra004355 Brassica rapa Bra004355 I 0.858
Bra038332 Brassica rapa Bra038332 I 0.858
BRADI3G38970 Brachypodium distachyon BRADI3G38970 I 0.840
Cagra.1157s0023 Capsella grandiflora Cagra.1157s0023 I 0.858
Carubv10020679m.g Capsella rubella Carubv10020679m.g I 0.858
cassava14.valid.m1 Manihot esculenta cassava14.valid.m1 I 0.858
cassava15.valid.m1 Manihot esculenta cassava15.valid.m1 I 0.858
cassava29314.valid.m1 Manihot esculenta cassava29314.valid.m1 I 0.858
cassava43370.valid.m1 Manihot esculenta cassava43370.valid.m1 I 0.858
Ca_22043 Cicer arietinum Ca_22043 I 0.858
Ciclev10012135m.g Citrus clementina Ciclev10012135m.g I 0.858
Ciclev10032020m.g Citrus clementina Ciclev10032020m.g I 0.858
Cla022382 Citrullus lanatus Cla022382 I 0.858
Cucsa.174600 Cucumis sativus Cucsa.174600 I 0.858
Cucsa.328060 Cucumis sativus Cucsa.328060 I 0.858
Eucgr.B03113 Eucalyptus grandis Eucgr.B03113 I 0.858
Eucgr.I02069 Eucalyptus grandis Eucgr.I02069 I 0.858
evm.TU.supercontig_289.6 Carica papaya evm.TU.supercontig_289.6 I 0.845
BIM2 Arabidopsis lyrata fgenesh2_kg.2__1159__AT1G69010.1 I 0.858
gene04534-v1.0-hybrid Fragaria vesca gene04534-v1.0-hybrid I 0.858
GLYMA01G09010 Glycine max GLYMA01G09010 I 0.846
GLYMA02G13670 Glycine max GLYMA02G13670 I 0.858
GLYMA08G28010 Glycine max GLYMA08G28010 I 0.858
GLYMA18G51080 Glycine max GLYMA18G51080 I 0.858
Gorai.001G197500 Gossypium raimondii Gorai.001G197500 I 0.858
Gorai.009G327300 Gossypium raimondii Gorai.009G327300 I 0.858
Gorai.013G098000 Gossypium raimondii Gorai.013G098000 I 0.858
LPERR08G15680 Leersia perrieri LPERR08G15680 I 0.840
Lus10004630.g Linum usitatissimum Lus10004630.g I 0.858
Lus10007974.g Linum usitatissimum Lus10007974.g I 0.850
Lus10013502.g Linum usitatissimum Lus10013502.g I 0.850
Lus10026684.g Linum usitatissimum Lus10026684.g I 0.858
MDP0000261293 Malus domestica MDP0000261293 I 0.858
mgf011829m Mimulus guttatus mgf011829m I 0.858
mgf013208m Mimulus guttatus mgf013208m I 0.858
MTR_5g048350 Medicago truncatula MTR_5g048350 I 0.858
MTR_7g017320 Medicago truncatula MTR_7g017320 I 0.858
OB08G25940 Oryza brachyantha OB08G25940 I 0.840
OGLUM08G19830 Oryza glumaepatula OGLUM08G19830 I 0.840
OLONG_003583 Oryza longistaminata OLONG_003583 I 0.840
ONIVA08G20800 Oryza nivara ONIVA08G20800 I 0.840
OPUNC08G16820 Oryza punctata OPUNC08G16820 I 0.840
orange1.1g019485m.g Citrus sinensis orange1.1g019485m.g I 0.858
orange1.1g019960m.g Citrus sinensis orange1.1g019960m.g I 0.858
ORGLA08G0164200 Oryza glaberrima ORGLA08G0164200 I 0.840
ORUFI08G21030 Oryza rufipogon ORUFI08G21030 I 0.840
OS08G0490000 Oryza sativa OS08G0490000 I 0.840
Pavir.Fb01833 Panicum virgatum Pavir.Fb01833 I 0.840
Pavir.J38910 Panicum virgatum Pavir.J38910 I 0.840
PGSC0003DMG400001919 Solanum tuberosum PGSC0003DMG400001919 I 0.858
PGSC0003DMG400019654 Solanum tuberosum PGSC0003DMG400019654 I 0.858
PK00238.1 Cannabis sativa PK00238.1 I 0.858
PK01364.1 Cannabis sativa PK01364.1 I 0.858
POPTR_0004s11180 Populus trichocarpa POPTR_0004s11180 I 0.858
POPTR_0008s11120 Populus trichocarpa POPTR_0008s11120 I 0.858
POPTR_0010s14740 Populus trichocarpa POPTR_0010s14740 I 0.858
POPTR_0017s13610 Populus trichocarpa POPTR_0017s13610 I 0.858
PRUPE_ppa008387mg Prunus persica PRUPE_ppa008387mg I 0.858
PRUPE_ppa008856mg Prunus persica PRUPE_ppa008856mg I 0.858
SapurV1A.0060s0510 Salix purpurea SapurV1A.0060s0510 I 0.858
SapurV1A.0084s0570 Salix purpurea SapurV1A.0084s0570 I 0.858
SapurV1A.0274s0040 Salix purpurea SapurV1A.0274s0040 I 0.858
SapurV1A.2517s0020 Salix purpurea SapurV1A.2517s0020 I 0.858
Sb07g028860 Sorghum bicolor Sb07g028860 I 0.840
SELMODRAFT_451475 Selaginella moellendorffii SELMODRAFT_451475 I 0.840
SELMODRAFT_451477 Selaginella moellendorffii SELMODRAFT_451477 I 0.840
Si013622m.g Setaria italica Si013622m.g I 0.840
Solyc04g005280.2 Solanum lycopersicum Solyc04g005280.2 I 0.858
Solyc05g011810.2 Solanum lycopersicum Solyc05g011810.2 I 0.858
TCM_011433 Theobroma cacao TCM_011433 I 0.858
TCM_019015 Theobroma cacao TCM_019015 I 0.858
Thhalv10018889m.g Eutrema salsugineum Thhalv10018889m.g I 0.858
Thhalv10027863m.g Eutrema salsugineum Thhalv10027863m.g I 0.858
BIM2 Vitis vinifera VIT_01s0010g00540 I 0.858
BIM3 Vitis vinifera VIT_14s0083g00930 I 0.858