CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.20505s0055
(
Boechera stricta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Bostr.20505s0055
T049101_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.20505s0055.1.p
bHLH
77
129
KKLNHNASERDRRKKINSLFSSLRSCLPASDQSKKLSIPATVSRSLKYIPELQ
Links
Other
bHLH
family TFs
Other
Boechera stricta
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27751.m000169
Ricinus communis
27751.m000169
N
0.881
ORG2
Arabidopsis thaliana
AT3G56970
N
0.846
ORG3
Arabidopsis thaliana
AT3G56980
N
0.864
Bo01495s010
Brassica oleracea
Bo01495s010
N
0.888
Bo4g112570
Brassica oleracea
Bo4g112570
N
0.847
Bo4g112590
Brassica oleracea
Bo4g112590
N
0.888
Bo6g072500
Brassica oleracea
Bo6g072500
N
0.876
Bo6g072510
Brassica oleracea
Bo6g072510
N
0.875
Bostr.20505s0056
Boechera stricta
Bostr.20505s0056
N
0.888
Bra003260
Brassica rapa
Bra003260
N
0.876
Bra003261
Brassica rapa
Bra003261
N
0.840
Bra014654
Brassica rapa
Bra014654
N
0.888
Bra014657
Brassica rapa
Bra014657
N
0.888
Bra014658
Brassica rapa
Bra014658
N
0.888
Cagra.0578s0027
Capsella grandiflora
Cagra.0578s0027
N
0.860
Cagra.0578s0028
Capsella grandiflora
Cagra.0578s0028
N
0.914
Carubv10017770m.g
Capsella rubella
Carubv10017770m.g
N
0.914
Carubv10019130m.g
Capsella rubella
Carubv10019130m.g
N
0.860
Ciclev10006413m.g
Citrus clementina
Ciclev10006413m.g
N
0.847
Cla001676
Citrullus lanatus
Cla001676
N
0.848
Cucsa.371810
Cucumis sativus
Cucsa.371810
N
0.872
BHLH039
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001751
N
0.914
gene27422-v1.0-hybrid
Fragaria vesca
gene27422-v1.0-hybrid
N
0.839
GLYMA03G28630
Glycine max
GLYMA03G28630
N
0.838
GLYMA19G31361
Glycine max
GLYMA19G31361
N
0.838
MDP0000641681
Malus domestica
MDP0000641681
N
0.856
MTR_1g048720
Medicago truncatula
MTR_1g048720
N
0.852
orange1.1g025477m.g
Citrus sinensis
orange1.1g025477m.g
N
0.847
Pm028948
Prunus mume
Pm028948
N
0.853
Pm028949
Prunus mume
Pm028949
N
0.838
Pm031098
Prunus mume
Pm031098
N
0.871
Pm031103
Prunus mume
Pm031103
N
0.840
POPTR_0006s03560
Populus trichocarpa
POPTR_0006s03560
N
0.875
POPTR_0006s03590
Populus trichocarpa
POPTR_0006s03590
N
0.848
POPTR_0016s03680
Populus trichocarpa
POPTR_0016s03680
N
0.850
PRUPE_ppa018670mg
Prunus persica
PRUPE_ppa018670mg
N
0.840
PRUPE_ppa024966mg
Prunus persica
PRUPE_ppa024966mg
N
0.838
SapurV1A.0159s0010
Salix purpurea
SapurV1A.0159s0010
N
0.877
SapurV1A.0196s0420
Salix purpurea
SapurV1A.0196s0420
N
0.848
SapurV1A.0196s0430
Salix purpurea
SapurV1A.0196s0430
N
0.877
TCM_024315
Theobroma cacao
TCM_024315
N
0.860
Thhalv10006189m.g
Eutrema salsugineum
Thhalv10006189m.g
N
0.885
Thhalv10006191m.g
Eutrema salsugineum
Thhalv10006191m.g
N
0.885
Thhalv10006491m.g
Eutrema salsugineum
Thhalv10006491m.g
N
0.856
VIT_08s0007g05300
Vitis vinifera
VIT_08s0007g05300
N
0.850