Carubv10019130m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10019130m.g T049409_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10019130m bHLH 75 127

Links

Other bHLH family TFs
Other Capsella rubella TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0578s0027 Capsella grandiflora Cagra.0578s0027 N 0.914
Bostr.20505s0056 Boechera stricta Bostr.20505s0056 N 0.886
SapurV1A.0196s0420 Salix purpurea SapurV1A.0196s0420 N 0.876
Bo01495s010 Brassica oleracea Bo01495s010 N 0.860
Bo4g112590 Brassica oleracea Bo4g112590 N 0.860
Bra014654 Brassica rapa Bra014654 N 0.860
Bra014657 Brassica rapa Bra014657 N 0.860
Bra014658 Brassica rapa Bra014658 N 0.860
BHLH039 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001751 N 0.860
Bostr.20505s0055 Boechera stricta Bostr.20505s0055 N 0.860
Cagra.0578s0028 Capsella grandiflora Cagra.0578s0028 N 0.860
Carubv10017770m.g Capsella rubella Carubv10017770m.g N 0.860
Thhalv10006491m.g Eutrema salsugineum Thhalv10006491m.g N 0.858
Thhalv10006189m.g Eutrema salsugineum Thhalv10006189m.g N 0.857
Thhalv10006191m.g Eutrema salsugineum Thhalv10006191m.g N 0.857
Bo6g072500 Brassica oleracea Bo6g072500 N 0.849
Bra003260 Brassica rapa Bra003260 N 0.849
Bo6g072510 Brassica oleracea Bo6g072510 N 0.848
POPTR_0006s03560 Populus trichocarpa POPTR_0006s03560 N 0.848
POPTR_0006s03590 Populus trichocarpa POPTR_0006s03590 N 0.848
Bo4g112570 Brassica oleracea Bo4g112570 N 0.847
Solyc10g079660.1 Solanum lycopersicum Solyc10g079660.1 N 0.846
ORG2 Arabidopsis thaliana AT3G56970 N 0.845
gene27422-v1.0-hybrid Fragaria vesca gene27422-v1.0-hybrid N 0.841