Sjc_0011830 (Schistosoma japonicum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Sjc_0011830 T051648_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nau
M03600_2.00 		Drosophila melanogaster
DBAACAGCTGTYVH
DBRACAGCTGTTVH		 SELEX
Nitta et al.(2015)
nau_1 		0.901 0.885
nau
M03601_2.00 		Drosophila melanogaster
NBRACAGCTGACRC
GYGTCAGCTGTYVN		 SELEX
Nitta et al.(2015)
nau_2 		0.901 0.885
nau
M03602_2.00 		Drosophila melanogaster
RCGWCAGCTGWCGC
GCGWCAGCTGWCGY		 SELEX
Nitta et al.(2015)
nau_3 		0.901 0.885
nau
M05949_2.00 		Drosophila melanogaster
CACCTGYY
RRCAGGTG		 B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922 		0.901 0.885
nau
M05950_2.00 		Drosophila melanogaster
RACASCTGACGC
GCGTCAGSTGTY		 B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922 		0.901 0.885
MYOD1
M04116_2.00 		Homo sapiens
BAACASSTGNYV
BRNCASSTGTTV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1 		0.853 0.846
MYOD1
M04117_2.00 		Homo sapiens
BRVCASMTGDCG
CGHCAKSTGBYV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2 		0.853 0.846
MYOD1
M04120_2.00 		Homo sapiens
NAACASSTGNYV
BRNCASSTGTTN		 SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1 		0.853 0.846
MYOD1
M04121_2.00 		Homo sapiens
BRMCASCTGDCR
YGHCAGSTGKYV		 SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2 		0.853 0.846
Myod1
M08060_2.00 		Mus musculus
NVNRRCAGSTGBN
NVCASCTGYYNBN		 ChIP-seq
Mathelier et al.(2014)
MA0499.1 		0.853 0.846
MYOD1
M08724_2.00 		Homo sapiens
NVNNRNRRCAGCTGN
NCAGCTGYYNYNNBN		 Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A 		0.853 0.846
Myod1
M08745_2.00 		Mus musculus
NVNRRNRRCAGSTGB
VCASCTGYYNYYNBN		 Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A 		0.853 0.846
MYOD1
M09838_2.00 		Homo sapiens
HRVCACCTGHBB
VVDCAGGTGBYD		 Transfac
Matys et al.(2006)
V$MYOD_01 		0.853 0.846
MYOD1
M09839_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOD_Q6_02 		0.853 0.846
MYOD1
M09840_2.00 		Homo sapiens
NVCABCTGNY
RNCAGVTGBN		 Transfac
Matys et al.(2006)
V$MYOD_Q6 		0.853 0.846
MYOD1
M04118_2.00 		Homo sapiens
BAACANVTGTYV
BRACABNTGTTV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1 		0.853 0.846
MYOD1
M04119_2.00 		Homo sapiens
BRRCASSTGDCR
YGHCASSTGYYV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2 		0.853 0.846
MYOD1
M04122_2.00 		Homo sapiens
NAMCASSTGBYV
BRVCASSTGKTN		 SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1 		0.853 0.846
MYOD1
M04123_2.00 		Homo sapiens
BRMCASVTGNCR
YGNCABSTGKYV		 SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2 		0.853 0.846
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000001101 bHLH 801 852

Links

Other bHLH family TFs
Other Schistosoma japonicum TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL014322 Aedes aegypti AAEL014322 I 0.847
AALB008334 Anopheles albimanus AALB008334 I 0.847
AARA002094 Anopheles arabiensis AARA002094 I 0.847
AATE018889 Anopheles atroparvus AATE018889 I 0.847
ACHR010174 Anopheles christyi ACHR010174 I 0.847
ACOM034431 Anopheles coluzzii ACOM034431 I 0.847
ACUA006973 Anopheles culicifacies ACUA006973 I 0.847
ADAC002492 Anopheles darlingi ADAC002492 I 0.847
ADIR010448 Anopheles dirus ADIR010448 I 0.847
AEPI006062 Anopheles epiroticus AEPI006062 I 0.847
AFAF001067 Anopheles farauti AFAF001067 I 0.847
AFUN011634 Anopheles funestus AFUN011634 I 0.847
AMAM006832 Anopheles maculatus AMAM006832 I 0.847
AMEM001613 Anopheles merus AMEM001613 I 0.847
AMIN003460 Anopheles minimus AMIN003460 I 0.847
AQUA000514 Anopheles quadriannulatus AQUA000514 I 0.847
ASTEI05690 Anopheles stephensi ASTEI05690 I 0.847
A_07871 Schistosoma haematobium A_07871 I 0.884
CapteG36721 Capitella teleta CapteG36721 I 0.871
Cflo_03885--XP_001120527.1_APIME Camponotus floridanus Cflo_03885--XP_001120527.1_APIME I 0.871
CGI_10007380 Crassostrea gigas CGI_10007380 I 0.871
CLEC002330 Cimex lectularius CLEC002330 I 0.871
CPIJ005345 Culex quinquefasciatus CPIJ005345 I 0.847
CpipJ_CPIJ005345 Culex pipiens CpipJ_CPIJ005345 I 0.847
csin100742 Clonorchis sinensis csin100742 I 0.884
D915_09890 Fasciola hepatica D915_09890 I 0.884
D917_06339 Trichinella nativa D917_06339 I 0.871
D918_04086 Trichuris suis D918_04086 I 0.871
ECANG7_02004 Echinococcus canadensis ECANG7_02004 I 0.893
ECPE_0001678601 Echinostoma caproni ECPE_0001678601 I 0.884
EFV52759 Trichinella spiralis EFV52759 I 0.871
EmuJ_001053100 Echinococcus multilocularis EmuJ_001053100 I 0.893
MYOD1 Anolis carolinensis ENSACAG00000000054 I 0.853
ENSAMEG00000018197 Ailuropoda melanoleuca ENSAMEG00000018197 I 0.853
MYOD1 Bos taurus ENSBTAG00000002216 I 0.853
ENSBTAP00000002868-D1 Bos grunniens ENSBTAP00000002868-D1 I 0.853
MYOD1 Canis familiaris ENSCAFG00000009066 I 0.853
MYOD1 Callithrix jacchus ENSCJAG00000009258 I 0.853
MYOD1 Cavia porcellus ENSCPOG00000021351 I 0.853
ENSCSAG00000004934 Chlorocebus sabaeus ENSCSAG00000004934 I 0.853
MYOD1 Dasypus novemcinctus ENSDNOG00000017164 I 0.853
MYOD1 Equus caballus ENSECAG00000002132 I 0.853
MYOD1 Echinops telfairi ENSETEG00000003979 I 0.853
MYOD1 Felis catus ENSFCAG00000004973 I 0.853
MYOD1 Homo sapiens ENSG00000129152 D 0.853
MYOD1 Gorilla gorilla ENSGGOG00000008222 I 0.853
MYOD1 Loxodonta africana ENSLAFG00000018353 I 0.853
ENSMEUG00000014270 Macropus eugenii ENSMEUG00000014270 I 0.853
MYOD1 Microcebus murinus ENSMICG00000005566 I 0.853
MYOD1 Myotis lucifugus ENSMLUG00000007940 I 0.853
MYOD1 Macaca mulatta ENSMMUG00000006400 I 0.853
MYOD1 Monodelphis domestica ENSMODG00000006749 I 0.853
ENSMPUG00000013563 Mustela putorius furo ENSMPUG00000013563 I 0.853
Myod1 Mus musculus ENSMUSG00000009471 D 0.853
ENSOARG00000025174 Ovis aries ENSOARG00000025174 I 0.853
MYOD1 Otolemur garnettii ENSOGAG00000029784 I 0.853
MYOD1 Ochotona princeps ENSOPRG00000002390 I 0.853
ENSPANG00000011946 Papio anubis ENSPANG00000011946 I 0.853
MYOD1 Procavia capensis ENSPCAG00000001317 I 0.853
ENSPPYG00000003449 Pongo abelii ENSPPYG00000003449 I 0.853
MYOD1 Pan troglodytes ENSPTRG00000003406 I 0.853
MYOD1 Pteropus vampyrus ENSPVAG00000012829 I 0.853
Myod1 Rattus norvegicus ENSRNOG00000011306 I 0.853
ENSSARG00000002401 Sorex araneus ENSSARG00000002401 I 0.853
ENSSHAG00000017220 Sarcophilus harrisii ENSSHAG00000017220 I 0.853
MYOD1 Sus scrofa ENSSSCG00000013375 I 0.853
ENSSTOG00000011556 Ictidomys tridecemlineatus ENSSTOG00000011556 I 0.853
MYOD1 Tupaia belangeri ENSTBEG00000003438 I 0.853
MYOD1 Tursiops truncatus ENSTTRG00000013869 I 0.853
nau Drosophila melanogaster FBgn0002922 D 0.901
GA10192 Drosophila pseudoobscura FBgn0070251 I 0.901
GF18746 Drosophila ananassae FBgn0095763 I 0.901
GG12413 Drosophila erecta FBgn0104701 I 0.901
GH13904 Drosophila grimshawi FBgn0121380 I 0.901
GI24830 Drosophila mojavensis FBgn0147551 I 0.901
GL13832 Drosophila persimilis FBgn0151437 I 0.901
GM23547 Drosophila sechellia FBgn0178413 I 0.901
GD18361 Drosophila simulans FBgn0189889 I 0.901
GJ24474 Drosophila virilis FBgn0211554 I 0.901
GK22777 Drosophila willistoni FBgn0224749 I 0.901
GE23932 Drosophila yakuba FBgn0241076 I 0.901
fgenesh2_pg.scaffold_226000031 Branchiostoma floridae fgenesh2_pg.scaffold_226000031 I 0.871
fgenesh2_pg.scaffold_226000032 Branchiostoma floridae fgenesh2_pg.scaffold_226000032 I 0.871
fgenesh2_pg.scaffold_29000123 Branchiostoma floridae fgenesh2_pg.scaffold_29000123 I 0.871
GB55306 Apis mellifera GB55306 I 0.871
HmN_000553800 Hymenolepis microstoma HmN_000553800 I 0.893
HNAJ_0001324201 Hymenolepis nana HNAJ_0001324201 I 0.893
Hsal_05065--XP_001120527.1_APIME Harpegnathos saltator Hsal_05065--XP_001120527.1_APIME I 0.871
LCUP007809 Lucilia cuprina LCUP007809 I 0.901
LDEC009949 Leptinotarsa decemlineata LDEC009949 I 0.850
LLOJ004446 Lutzomyia longipalpis LLOJ004446 I 0.871
MCOS_0000168001 Mesocestoides corti MCOS_0000168001 I 0.893
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I 0.871
NV10294 Nasonia vitripennis NV10294 I 0.871
Ocbimv22002759m.g Octopus bimaculoides Ocbimv22002759m.g I 0.871
PHUM424120 Pediculus humanus PHUM424120 I 0.877
RPRC009735 Rhodnius prolixus RPRC009735 I 0.871
Sakowv30008488m.g Saccoglossus kowalevskii Sakowv30008488m.g I 0.847
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I 0.871
Smp_167400 Schistosoma mansoni Smp_167400 I 0.884
SMU15001149 Schmidtea mediterranea SMU15001149 I 0.884
SPER_0001779001 Spirometra erinaceieuropaei SPER_0001779001 I 0.893
SPER_0002215301 Spirometra erinaceieuropaei SPER_0002215301 I 0.893
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I 0.871
SSLN_0000613901 Schistocephalus solidus SSLN_0000613901 I 0.893
T265_10140 Opisthorchis viverrini T265_10140 I 0.884
TASK_0000583801 Taenia asiatica TASK_0000583801 I 0.893
TC015855 Tribolium castaneum TC015855 I 0.850
TMUE_s0045001800 Trichuris muris TMUE_s0045001800 I 0.871
TRE_0000306101 Trichobilharzia regenti TRE_0000306101 I 0.884
TsM_000079400 Taenia solium TsM_000079400 I 0.893
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I 0.871
YQE_11476 Dendroctonus ponderosae YQE_11476 I 0.850