Ocbimv22002759m.g (Octopus bimaculoides)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ocbimv22002759m.g T048836_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH

DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.884 0.923
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC

GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.884 0.923
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC

GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.884 0.923
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY

RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.884 0.923
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC

GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.884 0.923
hlh-1
M00746_2.00
Caenorhabditis elegans
RACAGCTGNN

NNCAGCTGTY
PBM
DeMasi et al.(2011)
HLH-1
0.855 0.846
hlh-1
M00929_2.00
Caenorhabditis elegans
GACAGCTG

CAGCTGTC
PBM
Grove et al.(2009)
HLH1
0.855 0.846
hlh-1
M08063_2.00
Caenorhabditis elegans
VAACAGYTGNY

RNCARCTGTTB
ChIP-seq
Mathelier et al.(2014)
MA0545.1
0.855 0.846
hlh-1
M09481_2.00
Caenorhabditis elegans
NNRNCARNTGNY

RNCANYTGNYNN
Misc
Heinz et al.(2010)
cElegans-Embryo-HLH1_modEncode
0.855 0.846
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22002759m.p bHLH 54 105

Links

Other bHLH family TFs
Other Octopus bimaculoides TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CapteG36721 Capitella teleta CapteG36721 I 0.914
CGI_10007380 Crassostrea gigas CGI_10007380 I 0.914
EFV52759 Trichinella spiralis EFV52759 I 0.884
nau Drosophila melanogaster FBgn0002922 D 0.884
GA10192 Drosophila pseudoobscura FBgn0070251 I 0.884
GF18746 Drosophila ananassae FBgn0095763 I 0.884
GG12413 Drosophila erecta FBgn0104701 I 0.884
GH13904 Drosophila grimshawi FBgn0121380 I 0.884
GI24830 Drosophila mojavensis FBgn0147551 I 0.884
GL13832 Drosophila persimilis FBgn0151437 I 0.884
GM23547 Drosophila sechellia FBgn0178413 I 0.884
GD18361 Drosophila simulans FBgn0189889 I 0.884
GJ24474 Drosophila virilis FBgn0211554 I 0.884
GK22777 Drosophila willistoni FBgn0224749 I 0.884
GE23932 Drosophila yakuba FBgn0241076 I 0.884
GB55306 Apis mellifera GB55306 I 0.884
NV10294 Nasonia vitripennis NV10294 I 0.884
RPRC009735 Rhodnius prolixus RPRC009735 I 0.884
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I 0.884
Cflo_03885--XP_001120527.1_APIME Camponotus floridanus Cflo_03885--XP_001120527.1_APIME I 0.884
Hsal_05065--XP_001120527.1_APIME Harpegnathos saltator Hsal_05065--XP_001120527.1_APIME I 0.884
fgenesh2_pg.scaffold_226000031 Branchiostoma floridae fgenesh2_pg.scaffold_226000031 I 0.884
fgenesh2_pg.scaffold_226000032 Branchiostoma floridae fgenesh2_pg.scaffold_226000032 I 0.884
fgenesh2_pg.scaffold_29000123 Branchiostoma floridae fgenesh2_pg.scaffold_29000123 I 0.884
CLEC002330 Cimex lectularius CLEC002330 I 0.884
LCUP007809 Lucilia cuprina LCUP007809 I 0.884
LLOJ004446 Lutzomyia longipalpis LLOJ004446 I 0.884
D917_06339 Trichinella nativa D917_06339 I 0.884
D918_04086 Trichuris suis D918_04086 I 0.884
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I 0.884
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I 0.884
TMUE_s0045001800 Trichuris muris TMUE_s0045001800 I 0.884
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I 0.884
LotgiG99982 Lottia gigantea LotgiG99982 I 0.879
Smp_167400 Schistosoma mansoni Smp_167400 I 0.871
Sjc_0011830 Schistosoma japonicum Sjc_0011830 I 0.871
SMU15001149 Schmidtea mediterranea SMU15001149 I 0.871
A_07871 Schistosoma haematobium A_07871 I 0.871
csin100742 Clonorchis sinensis csin100742 I 0.871
D915_09890 Fasciola hepatica D915_09890 I 0.871
ECPE_0001678601 Echinostoma caproni ECPE_0001678601 I 0.871
T265_10140 Opisthorchis viverrini T265_10140 I 0.871
TRE_0000306101 Trichobilharzia regenti TRE_0000306101 I 0.871
HelroG188369 Helobdella robusta HelroG188369 N 0.866
TC015855 Tribolium castaneum TC015855 I 0.863
YQE_11476 Dendroctonus ponderosae YQE_11476 I 0.863
LDEC009949 Leptinotarsa decemlineata LDEC009949 I 0.863
CpipJ_CPIJ005345 Culex pipiens CpipJ_CPIJ005345 I 0.860
AAEL014322 Aedes aegypti AAEL014322 I 0.860
ADAC002492 Anopheles darlingi ADAC002492 I 0.860
CPIJ005345 Culex quinquefasciatus CPIJ005345 I 0.860
PHUM424120 Pediculus humanus PHUM424120 I 0.860
Sakowv30008488m.g Saccoglossus kowalevskii Sakowv30008488m.g I 0.860
AALB008334 Anopheles albimanus AALB008334 I 0.860
AARA002094 Anopheles arabiensis AARA002094 I 0.860
AATE018889 Anopheles atroparvus AATE018889 I 0.860
ACHR010174 Anopheles christyi ACHR010174 I 0.860
ACOM034431 Anopheles coluzzii ACOM034431 I 0.860
ACUA006973 Anopheles culicifacies ACUA006973 I 0.860
ADIR010448 Anopheles dirus ADIR010448 I 0.860
AEPI006062 Anopheles epiroticus AEPI006062 I 0.860
AFAF001067 Anopheles farauti AFAF001067 I 0.860
AFUN011634 Anopheles funestus AFUN011634 I 0.860
AMAM006832 Anopheles maculatus AMAM006832 I 0.860
AMEM001613 Anopheles merus AMEM001613 I 0.860
AMIN003460 Anopheles minimus AMIN003460 I 0.860
AQUA000514 Anopheles quadriannulatus AQUA000514 I 0.860
ASTEI05690 Anopheles stephensi ASTEI05690 I 0.860
WUBG_05117 Wuchereria bancrofti WUBG_05117 I 0.855
Bm1750 Brugia malayi Bm1750 I 0.855
CBG13470 Caenorhabditis briggsae CBG13470 I 0.855
CBN11281 Caenorhabditis brenneri CBN11281 I 0.855
CJA13327 Caenorhabditis japonica CJA13327 I 0.855
CRE17301 Caenorhabditis remanei CRE17301 I 0.855
LOAG_16988 Loa loa LOAG_16988 I 0.855
hlh-1 Caenorhabditis elegans WBGene00001948 D 0.855
WBGene00247572 Onchocerca volvulus WBGene00247572 I 0.855
BGLB008104 Biomphalaria glabrata BGLB008104 N 0.855
ACOC_0000253201 Angiostrongylus costaricensis ACOC_0000253201 I 0.855
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I 0.855
ANCCEY_00328 Ancylostoma ceylanicum ANCCEY_00328 I 0.855
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I 0.855
ASU_01867 Ascaris suum ASU_01867 I 0.855
DICVIV_08170 Dictyocaulus viviparus DICVIV_08170 I 0.855
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I 0.855
HCOI02168200 Haemonchus contortus HCOI02168200 I 0.855
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I 0.855
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I 0.855
NECAME_14163 Necator americanus NECAME_14163 I 0.855
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I 0.855
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I 0.855
OFLC_0000064301 Onchocerca flexuosa OFLC_0000064301 I 0.855
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I 0.855
TELCIR_07640 Teladorsagia circumcincta TELCIR_07640 I 0.855
TELCIR_14945 Teladorsagia circumcincta TELCIR_14945 I 0.855
ECANG7_02004 Echinococcus canadensis ECANG7_02004 I 0.850
EmuJ_001053100 Echinococcus multilocularis EmuJ_001053100 I 0.850
HmN_000553800 Hymenolepis microstoma HmN_000553800 I 0.850
HNAJ_0001324201 Hymenolepis nana HNAJ_0001324201 I 0.850
MCOS_0000168001 Mesocestoides corti MCOS_0000168001 I 0.850
SPER_0001779001 Spirometra erinaceieuropaei SPER_0001779001 I 0.850
SPER_0002215301 Spirometra erinaceieuropaei SPER_0002215301 I 0.850
SSLN_0000613901 Schistocephalus solidus SSLN_0000613901 I 0.850
TASK_0000583801 Taenia asiatica TASK_0000583801 I 0.850
TsM_000079400 Taenia solium TsM_000079400 I 0.850
ENSMPUG00000011508 Mustela putorius furo ENSMPUG00000011508 I 0.845
ENSAMXG00000000425 Astyanax mexicanus ENSAMXG00000000425 I 0.844
myf6 Danio rerio ENSDARG00000029830 I 0.844
Myf6 Dipodomys ordii ENSDORG00000015435 I 0.844
ENSLACG00000010731 Latimeria chalumnae ENSLACG00000010731 I 0.844
MYOG Pteropus vampyrus ENSPVAG00000013141 I 0.842