XBP1 (Gallus gallus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSGALG00000005796 T059837_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
XBP1
M02825_2.00 		Homo sapiens
GVTGACGTCABB
VVTGACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_1 		0.832 0.812
XBP1
M02826_2.00 		Homo sapiens
GVTGACGTGKCVHW
WDBGMCACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_2 		0.832 0.812
XBP1
M02730_2.00 		Homo sapiens
GACGTGKCNNW
WNNGMCACGTC		 SELEX
Jolma et al.(2010)
XBP1_monomer 		0.832 0.812
XBP1
M04231_2.00 		Homo sapiens
NVTGACGTGKNN
NNMCACGTCABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_1 		0.832 0.812
XBP1
M04232_2.00 		Homo sapiens
NVTKACGTMABV
BVTKACGTMABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_2 		0.832 0.812
XBP1
M04010_2.00 		Homo sapiens
GRTGACGTGKCV
BGMCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.1 		0.832 0.812
XBP1
M04011_2.00 		Homo sapiens
GRTGACGTCAYS
SRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.2 		0.832 0.812
XBP1
M04012_2.00 		Homo sapiens
KGMCACGTGKMCH
DGKMCACGTGKCM		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.3 		0.832 0.812
XBP1
M09932_2.00 		Homo sapiens
NHNWDHRVTGACGTGKHNHWDDHB
VDHHWDNDMCACGTCABYDHWNDN		 Transfac
Matys et al.(2006)
V$HTF_01 		0.832 0.812
XBP1
M09933_2.00 		Homo sapiens
DBRHTKACGTGKHNHWD
HWDNDMCACGTMADYVH		 Transfac
Matys et al.(2006)
V$XBP1_01 		0.832 0.812
XBP1
M04233_2.00 		Homo sapiens
BKMCACRTCAYS
SRTGAYGTGKMV		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_1 		0.832 0.812
XBP1
M04234_2.00 		Homo sapiens
VVTGWCRTCAYS
SRTGAYGWCABB		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_2 		0.832 0.812
Xbp1
M00757_2.00 		Mus musculus
NNHBAYDNNN
NNNHRTVDNN		 PBM
Weirauch et al.(2013)
pTH2852 		0.832 0.781
Xbp1
M01802_2.00 		Mus musculus
NHNACGYNN
NNRCGTNDN		 PBM
Weirauch et al.(2014)
pTH5019 		0.832 0.781
Xbp1
M08818_2.00 		Mus musculus
GACGTGKCMHWD
HWDKGMCACGTC		 Misc
Kulakovskiy et al.(2013)
XBP1_MOUSE.H11MO.0.C 		0.832 0.781
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000009296 bZIP 55 123

Links

Other bZIP family TFs
Other Gallus gallus TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA007096 Oryza indica BGIOSGA007096 N
BRADI3G04450 Brachypodium distachyon BRADI3G04450 N
F775_24520 Aegilops tauschii F775_24520 N
GRMZM2G012262 Zea mays GRMZM2G012262 N
GSMUA_Achr6G29060_001 Musa acuminata GSMUA_Achr6G29060_001 N
LPERR02G03890 Leersia perrieri LPERR02G03890 N
OB02G13770 Oryza brachyantha OB02G13770 N
OBART02G04450 Oryza barthii OBART02G04450 N
OGLUM02G04370 Oryza glumaepatula OGLUM02G04370 N
OLONG_017077 Oryza longistaminata OLONG_017077 N
ONIVA02G04450 Oryza nivara ONIVA02G04450 N
OPUNC02G03720 Oryza punctata OPUNC02G03720 N
ORGLA02G0041200 Oryza glaberrima ORGLA02G0041200 N
ORUFI02G04590 Oryza rufipogon ORUFI02G04590 N
OS02G0158400 Oryza sativa OS02G0158400 N
Pavir.Aa03265 Panicum virgatum Pavir.Aa03265 N
Pavir.Ab00418 Panicum virgatum Pavir.Ab00418 N
Sb04g004060 Sorghum bicolor Sb04g004060 N
Si018290m.g Setaria italica Si018290m.g N
Traes_6BS_0A692E6F6 Triticum aestivum Traes_6BS_0A692E6F6 N
Traes_6DS_1FC471B7F Triticum aestivum Traes_6DS_1FC471B7F N
TRIUR3_19131 Triticum urartu TRIUR3_19131 N