CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA11G30940
(
Glycine max
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
GLYMA11G30940
T062965_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.846
0.952
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
0.846
0.935
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.832
0.919
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.832
0.919
BZIP18
M01777_2.00
Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN
PBM
Weirauch et al.(2014)
pTH7316
0.831
0.919
BZIP18
M06768_2.00
Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a
0.831
0.919
BZIP18
M06769_2.00
Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP18_col_v31
0.831
0.919
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA11G30940.1
bZIP
185
246
DPKRAKRILANRQSAARSKERKARYIQELEHKVQTLQTEATTLSAQLTLYQRDTTGLSSENT
Links
Other
bZIP
family TFs
Other
Glycine max
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27568.m000253
Ricinus communis
27568.m000253
N
0.000
cassava15723.m1
Manihot esculenta
cassava15723.m1
N
0.000
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.000
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.000
evm.TU.supercontig_1.422
Carica papaya
evm.TU.supercontig_1.422
N
0.000
Gorai.010G201000
Gossypium raimondii
Gorai.010G201000
N
0.000
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.000
Lus10023404.g
Linum usitatissimum
Lus10023404.g
N
0.000
Lus10040284.g
Linum usitatissimum
Lus10040284.g
N
0.000
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.000
POPTR_0008s05750
Populus trichocarpa
POPTR_0008s05750
N
0.000
XM_002316242.1
Populus trichocarpa
POPTR_0010s20980
N
0.000
SapurV1A.0451s0060
Salix purpurea
SapurV1A.0451s0060
N
0.000
TCM_042705
Theobroma cacao
TCM_042705
N
0.000
VIT_13s0019g01700
Vitis vinifera
VIT_13s0019g01700
N
0.000
VIT_13s0019g01790
Vitis vinifera
VIT_13s0019g01790
N
0.000
VIT_13s0019g01810
Vitis vinifera
VIT_13s0019g01810
N
0.000