Ciclev10032076m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10032076m.g T071657_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK16335.1
M01157_2.00 		Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN		 PBM
Lambert et al.(2019)
pTH10187 		0.846 0.968
PK00315.1
M01153_2.00 		Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN		 PBM
Lambert et al.(2019)
pTH10085 		0.846 0.952
AtbZIP52
M06746_2.00 		Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a 		0.832 0.887
AtbZIP52
M06747_2.00 		Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_col_v31 		0.832 0.887
BZIP18
M01777_2.00 		Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN		 PBM
Weirauch et al.(2014)
pTH7316 		0.831 0.919
BZIP18
M06768_2.00 		Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a 		0.831 0.919
BZIP18
M06769_2.00 		Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP18_col_v31 		0.831 0.919
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10032076m bZIP 128 189
Ciclev10032077m bZIP 128 189

Links

Other bZIP family TFs
Other Citrus clementina TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002363 Ricinus communis 29729.m002363 I 0.819
29804.m001495 Ricinus communis 29804.m001495 I 0.846
AtbZIP52 Arabidopsis lyrata Al_scaffold_0001_623 I 0.832
AMTR_s00077p00070990 Amborella trichopoda AMTR_s00077p00070990 I 0.846
Aquca_004_00525 Aquilegia coerulea Aquca_004_00525 I 0.846
Aquca_045_00222 Aquilegia coerulea Aquca_045_00222 I 0.832
AtbZIP52 Arabidopsis thaliana AT1G06850 D 0.832
BZIP18 Arabidopsis thaliana AT2G40620 D 0.831
BGIOSGA012577 Oryza indica BGIOSGA012577 I 0.846
BGIOSGA023710 Oryza indica BGIOSGA023710 I 0.846
Bo4g012700 Brassica oleracea Bo4g012700 I 0.831
Bo4g190320 Brassica oleracea Bo4g190320 I 0.831
Bo8g007220 Brassica oleracea Bo8g007220 I 0.832
Bo8g114410 Brassica oleracea Bo8g114410 I 0.832
Bostr.25219s0275 Boechera stricta Bostr.25219s0275 I 0.832
Bostr.9345s0072 Boechera stricta Bostr.9345s0072 I 0.831
Bra004582 Brassica rapa Bra004582 I 0.831
Bra016980 Brassica rapa Bra016980 I 0.831
Bra030663 Brassica rapa Bra030663 I 0.832
Bra031541 Brassica rapa Bra031541 I 0.832
Cagra.1642s0027 Capsella grandiflora Cagra.1642s0027 I 0.831
Cagra.1671s0308 Capsella grandiflora Cagra.1671s0308 I 0.832
Carubv10009673m.g Capsella rubella Carubv10009673m.g I 0.832
Carubv10025182m.g Capsella rubella Carubv10025182m.g I 0.831
cassava43674.valid.m1 Manihot esculenta cassava43674.valid.m1 I 0.833
Ca_04108 Cicer arietinum Ca_04108 I 0.804
Ca_08929 Cicer arietinum Ca_08929 I 0.846
Ca_15657 Cicer arietinum Ca_15657 I 0.846
Cla007409 Citrullus lanatus Cla007409 I 0.846
Cla013626 Citrullus lanatus Cla013626 I 0.846
Cucsa.118900 Cucumis sativus Cucsa.118900 I 0.846
Cucsa.143950 Cucumis sativus Cucsa.143950 I 0.846
Eucgr.G03135 Eucalyptus grandis Eucgr.G03135 I 0.832
Eucgr.J00119 Eucalyptus grandis Eucgr.J00119 I 0.832
evm.TU.supercontig_19.62 Carica papaya evm.TU.supercontig_19.62 I 0.819
evm.TU.supercontig_2.298 Carica papaya evm.TU.supercontig_2.298 I 0.846
F775_31774 Aegilops tauschii F775_31774 I 0.798
F775_32183 Aegilops tauschii F775_32183 I 0.835
fgenesh2_kg.4__2179__AT2G40620.1 Arabidopsis lyrata fgenesh2_kg.4__2179__AT2G40620.1 I 0.831
gene21344-v1.0-hybrid Fragaria vesca gene21344-v1.0-hybrid I 0.846
gene28103-v1.0-hybrid Fragaria vesca gene28103-v1.0-hybrid I 0.832
GLYMA02G40270 Glycine max GLYMA02G40270 I 0.846
GLYMA11G30940 Glycine max GLYMA11G30940 I 0.846
GLYMA14G38460 Glycine max GLYMA14G38460 I 0.846
GLYMA18G05880 Glycine max GLYMA18G05880 I 0.846
Gorai.009G293600 Gossypium raimondii Gorai.009G293600 I 0.819
Gorai.010G218700 Gossypium raimondii Gorai.010G218700 I 0.818
Gorai.011G209200 Gossypium raimondii Gorai.011G209200 I 0.819
GRMZM2G062391 Zea mays GRMZM2G062391 I 0.835
GRMZM2G151295 Zea mays GRMZM2G151295 I 0.846
GSMUA_Achr11G23650_001 Musa acuminata GSMUA_Achr11G23650_001 I 0.806
GSMUA_Achr2G18830_001 Musa acuminata GSMUA_Achr2G18830_001 I 0.846
GSMUA_Achr5G29650_001 Musa acuminata GSMUA_Achr5G29650_001 I 0.793
GSMUA_AchrUn_randomG14020_001 Musa acuminata GSMUA_AchrUn_randomG14020_001 I 0.815
LjSGA_023972.1 Lotus japonicus LjSGA_023972.1 I 0.798
LPERR03G14390 Leersia perrieri LPERR03G14390 I 0.846
LPERR07G23230 Leersia perrieri LPERR07G23230 I 0.789
Lus10008605.g Linum usitatissimum Lus10008605.g I 0.846
Lus10009907.g Linum usitatissimum Lus10009907.g I 0.846
Lus10012881.g Linum usitatissimum Lus10012881.g I 0.819
Lus10030531.g Linum usitatissimum Lus10030531.g I 0.819
Lus10042211.g Linum usitatissimum Lus10042211.g I 0.846
MDP0000129203 Malus domestica MDP0000129203 I 0.846
MDP0000210251 Malus domestica MDP0000210251 I 0.846
MDP0000247372 Malus domestica MDP0000247372 I 0.784
MDP0000297791 Malus domestica MDP0000297791 I 0.835
MDP0000305387 Malus domestica MDP0000305387 I 0.835
mgf007830m Mimulus guttatus mgf007830m I 0.835
MLOC_44311 Hordeum vulgare MLOC_44311 I 0.846
MLOC_51623 Hordeum vulgare MLOC_51623 I 0.794
MLOC_60045 Hordeum vulgare MLOC_60045 I 0.835
MTR_3g094020 Medicago truncatula MTR_3g094020 I 0.804
MTR_3g467120 Medicago truncatula MTR_3g467120 I 0.846
MTR_5g075390 Medicago truncatula MTR_5g075390 I 0.846
OB03G26210 Oryza brachyantha OB03G26210 I 0.789
OB07G31840 Oryza brachyantha OB07G31840 I 0.789
OBART03G16510 Oryza barthii OBART03G16510 I 0.789
OBART07G26390 Oryza barthii OBART07G26390 I 0.846
OGLUM07G26420 Oryza glumaepatula OGLUM07G26420 I 0.846
OLONG_008214 Oryza longistaminata OLONG_008214 I 0.789
OLONG_019327 Oryza longistaminata OLONG_019327 I 0.789
OMERI03G14760 Oryza meridionalis OMERI03G14760 I 0.846
OMERI07G23010 Oryza meridionalis OMERI07G23010 I 0.789
ONIVA03G17500 Oryza nivara ONIVA03G17500 I 0.846
ONIVA07G26100 Oryza nivara ONIVA07G26100 I 0.846
OPUNC03G15960 Oryza punctata OPUNC03G15960 I 0.846
OPUNC07G24840 Oryza punctata OPUNC07G24840 I 0.846
orange1.1g020026m.g Citrus sinensis orange1.1g020026m.g I 0.846
ORGLA03G0157900 Oryza glaberrima ORGLA03G0157900 I 0.783
ORGLA07G0207300 Oryza glaberrima ORGLA07G0207300 I 0.789
ORUFI03G17050 Oryza rufipogon ORUFI03G17050 I 0.846
RF2B Oryza sativa OS03G0336200 I 0.846
Pavir.Bb03755 Panicum virgatum Pavir.Bb03755 I 0.833
Pavir.Ib01574 Panicum virgatum Pavir.Ib01574 I 0.846
Pavir.J07252 Panicum virgatum Pavir.J07252 I 0.783
PDK_20s1367981g001 Phoenix dactylifera PDK_20s1367981g001 I 0.798
PDK_20s1563121g001 Phoenix dactylifera PDK_20s1563121g001 I 0.786
PGSC0003DMG400016651 Solanum tuberosum PGSC0003DMG400016651 I 0.832
PGSC0003DMG400027599 Solanum tuberosum PGSC0003DMG400027599 I 0.832
PK00315.1 Cannabis sativa PK00315.1 D 0.846
PK16335.1 Cannabis sativa PK16335.1 D 0.846
Pm000251 Prunus mume Pm000251 I 0.846
Pm019060 Prunus mume Pm019060 I 0.846
POPTR_0013s09350 Populus trichocarpa POPTR_0013s09350 I 0.815
POPTR_0013s15280 Populus trichocarpa POPTR_0013s15280 I 0.844
POPTR_0019s15040 Populus trichocarpa POPTR_0019s15040 I 0.846
PRUPE_ppa006097mg Prunus persica PRUPE_ppa006097mg I 0.846
PRUPE_ppa007645mg Prunus persica PRUPE_ppa007645mg I 0.846
SapurV1A.0182s0020 Salix purpurea SapurV1A.0182s0020 I 0.799
SapurV1A.0215s0230 Salix purpurea SapurV1A.0215s0230 I 0.846
SapurV1A.3480s0020 Salix purpurea SapurV1A.3480s0020 I 0.846
SapurV1A.4004s0010 Salix purpurea SapurV1A.4004s0010 I 0.799
Si030224m.g Setaria italica Si030224m.g I 0.833
Si036380m.g Setaria italica Si036380m.g I 0.846
Solyc06g048630.2 Solanum lycopersicum Solyc06g048630.2 I 0.832
TCM_042286 Theobroma cacao TCM_042286 I 0.846
TCM_045524 Theobroma cacao TCM_045524 I 0.833
Thhalv10008146m.g Eutrema salsugineum Thhalv10008146m.g I 0.832
Thhalv10016819m.g Eutrema salsugineum Thhalv10016819m.g I 0.831
Traes_2AS_3B7BE6FDC Triticum aestivum Traes_2AS_3B7BE6FDC I 0.789
Traes_2BS_1B0F27580 Triticum aestivum Traes_2BS_1B0F27580 I 0.844
Traes_2DS_93EAEC654 Triticum aestivum Traes_2DS_93EAEC654 I 0.846
Traes_4AS_45B416B25 Triticum aestivum Traes_4AS_45B416B25 I 0.835
Traes_4BL_9422485B3 Triticum aestivum Traes_4BL_9422485B3 I 0.835
Traes_4DL_19DC0CA31 Triticum aestivum Traes_4DL_19DC0CA31 I 0.835
AtbZIP52 Vitis vinifera VIT_06s0004g08070 I 0.846
VIT_13s0067g02900 Vitis vinifera VIT_13s0067g02900 I 0.832