bcl11ab (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000063153 T090990_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.815 0.939
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.815 0.939
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.815 0.939
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.811 0.921
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.811 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000118033 C2H2 ZF 335 356
ENSDARP00000118033 C2H2 ZF 362 384
ENSDARP00000118033 C2H2 ZF 683 705
ENSDARP00000118033 C2H2 ZF 711 733
ENSDARP00000118033 C2H2 ZF 741 764

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000616 Calypte anna Aan_R000616 I 0.811
Aan_R006276 Calypte anna Aan_R006276 I 0.815
Afo_R004626 Aptenodytes forsteri Afo_R004626 I 0.811
Afo_R011357 Aptenodytes forsteri Afo_R011357 I 0.815
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I 0.815
BGLB012676 Biomphalaria glabrata BGLB012676 I 0.764
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I 0.815
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I 0.811
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I 0.811
BCL11A Anolis carolinensis ENSACAG00000015159 I 0.815
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I 0.815
ENSAMXG00000004597 Astyanax mexicanus ENSAMXG00000004597 I 0.815
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I 0.811
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I 0.811
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I 0.811
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I 0.815
BCL11B Bos taurus ENSBTAG00000018019 I 0.811
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I 0.815
BCL11B Canis familiaris ENSCAFG00000017809 I 0.811
BCL11B Callithrix jacchus ENSCJAG00000006713 I 0.811
BCL11A Callithrix jacchus ENSCJAG00000009226 I 0.815
BCL11A Cavia porcellus ENSCPOG00000007587 I 0.815
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I 0.811
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I 0.811
bcl11aa Danio rerio ENSDARG00000061352 I 0.827
im:7142702 Danio rerio ENSDARG00000067727 I 0.811
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I 0.811
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I 0.815
Bcl11a Dipodomys ordii ENSDORG00000010064 I 0.815
BCL11A Erinaceus europaeus ENSEEUG00000010958 I 0.815
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I 0.815
BCL11A Felis catus ENSFCAG00000027154 I 0.815
BCL11A Homo sapiens ENSG00000119866 D 0.815
BCL11B Homo sapiens ENSG00000127152 D 0.811
im:7142702 Gasterosteus aculeatus ENSGACG00000005537 I 0.811
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I 0.803
bcl11aa Gasterosteus aculeatus ENSGACG00000013419 I 0.811
bcl11ab Gasterosteus aculeatus ENSGACG00000019222 I 0.825
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I 0.815
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I 0.811
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I 0.811
BCL11B Gorilla gorilla ENSGGOG00000001232 I 0.811
BCL11A Gorilla gorilla ENSGGOG00000007337 I 0.815
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I 0.803
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I 0.823
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I 0.817
BCL11A Loxodonta africana ENSLAFG00000003101 I 0.815
BCL11B Loxodonta africana ENSLAFG00000009254 I 0.811
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I 0.806
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I 0.825
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I 0.815
BCL11A Meleagris gallopavo ENSMGAG00000013042 I 0.815
BCL11A Microcebus murinus ENSMICG00000015052 I 0.815
BCL11B Macaca mulatta ENSMMUG00000003261 I 0.811
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I 0.815
BCL11B Monodelphis domestica ENSMODG00000012964 I 0.811
Bcl11a Mus musculus ENSMUSG00000000861 I 0.815
Bcl11b Mus musculus ENSMUSG00000048251 I 0.811
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I 0.811
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I 0.817
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I 0.811
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I 0.815
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I 0.807
BCL11B Otolemur garnettii ENSOGAG00000033204 I 0.811
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I 0.814
ENSONIG00000002906 Oreochromis niloticus ENSONIG00000002906 I 0.816
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I 0.806
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I 0.827
bcl11aa Oryzias latipes ENSORLG00000001704 I 0.816
im:7142702 Oryzias latipes ENSORLG00000010488 I 0.813
bcl11ba Oryzias latipes ENSORLG00000010826 I 0.806
bcl11ab Oryzias latipes ENSORLG00000013169 I 0.827
ENSP00000338774 Macaca fascicularis ENSP00000338774 I 0.815
ENSP00000349723 Macaca fascicularis ENSP00000349723 I 0.807
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I 0.811
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I 0.811
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I 0.803
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I 0.827
ENSPFOG00000019062 Poecilia formosa ENSPFOG00000019062 I 0.816
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I 0.811
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I 0.811
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I 0.815
BCL11B Pan troglodytes ENSPTRG00000006707 I 0.811
BCL11A Pteropus vampyrus ENSPVAG00000000042 I 0.815
BCL11B Pteropus vampyrus ENSPVAG00000015516 I 0.811
Bcl11b Rattus norvegicus ENSRNOG00000005776 I 0.811
Bcl11a Rattus norvegicus ENSRNOG00000007049 I 0.815
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I 0.811
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I 0.815
BCL11B Sus scrofa ENSSSCG00000002507 I 0.811
BCL11A Sus scrofa ENSSSCG00000008392 I 0.815
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I 0.815
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I 0.811
BCL11A Taeniopygia guttata ENSTGUG00000006790 I 0.815
BCL11B Taeniopygia guttata ENSTGUG00000012711 I 0.811
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I 0.806
im:7142702 Tetraodon nigroviridis ENSTNIG00000009693 I 0.801
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I 0.827
bcl11ba Takifugu rubripes ENSTRUG00000003531 I 0.806
bcl11aa Takifugu rubripes ENSTRUG00000003815 I 0.811
bcl11ab Takifugu rubripes ENSTRUG00000013751 I 0.827
im:7142702 Takifugu rubripes ENSTRUG00000018074 I 0.814
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I 0.815
BCL11A Tursiops truncatus ENSTTRG00000006191 I 0.815
BCL11B Tursiops truncatus ENSTTRG00000012140 I 0.806
BCL11A Vicugna pacos ENSVPAG00000000491 I 0.815
ENSXMAG00000007242 Xiphophorus maculatus ENSXMAG00000007242 I 0.813
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I 0.811
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I 0.803
fgenesh2_pg.scaffold_136000067 Branchiostoma floridae fgenesh2_pg.scaffold_136000067 I 0.766
Gfo_R006733 Geospiza fortis Gfo_R006733 I 0.811
Gfo_R008167 Geospiza fortis Gfo_R008167 I 0.815
HHAL008065-PA Halyomorpha halys HHAL008065-PA I 0.765
ISCW016418 Ixodes scapularis ISCW016418 I 0.780
L798_02171 Zootermopsis nevadensis L798_02171 I 0.761
LotgiG139415 Lottia gigantea LotgiG139415 I 0.765
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I 0.793
PHUM606430 Pediculus humanus PHUM606430 I 0.771
Pvit_09536 Pogona vitticeps Pvit_09536 I 0.811
Pvit_18645 Pogona vitticeps Pvit_18645 I 0.815
RPRC001562 Rhodnius prolixus RPRC001562 I 0.766
Sakowv30026316m.g Saccoglossus kowalevskii Sakowv30026316m.g I 0.813
SMAR003355 Strigamia maritima SMAR003355 I 0.792
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I 0.812
bcl11a Xenopus tropicalis XB-GENE-486641 I 0.815