im:7142702 (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000005537 T095592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.823 0.956
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.823 0.956
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.804 0.921
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.804 0.921
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.804 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000007319 C2H2 ZF 394 415
ENSGACP00000007319 C2H2 ZF 421 443
ENSGACP00000007319 C2H2 ZF 717 739
ENSGACP00000007319 C2H2 ZF 745 767
ENSGACP00000007319 C2H2 ZF 775 798

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000616 Calypte anna Aan_R000616 I 0.823
Aan_R006276 Calypte anna Aan_R006276 I 0.804
ACYPI007319 Acyrthosiphon pisum ACYPI007319 I 0.761
Afo_R004626 Aptenodytes forsteri Afo_R004626 I 0.823
Afo_R011357 Aptenodytes forsteri Afo_R011357 I 0.804
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I 0.804
BGLB012676 Biomphalaria glabrata BGLB012676 I 0.761
CapteG65449 Capitella teleta CapteG65449 I 0.758
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I 0.804
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I 0.823
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I 0.823
BCL11A Anolis carolinensis ENSACAG00000015159 I 0.804
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I 0.804
ENSAMXG00000004597 Astyanax mexicanus ENSAMXG00000004597 I 0.804
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I 0.823
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I 0.827
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I 0.823
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I 0.804
BCL11B Bos taurus ENSBTAG00000018019 I 0.823
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I 0.804
BCL11B Canis familiaris ENSCAFG00000017809 I 0.823
BCL11B Callithrix jacchus ENSCJAG00000006713 I 0.823
BCL11A Callithrix jacchus ENSCJAG00000009226 I 0.804
BCL11A Cavia porcellus ENSCPOG00000007587 I 0.804
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I 0.823
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I 0.823
bcl11aa Danio rerio ENSDARG00000061352 I 0.811
bcl11ab Danio rerio ENSDARG00000063153 I 0.811
im:7142702 Danio rerio ENSDARG00000067727 I 0.827
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I 0.823
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I 0.804
Bcl11a Dipodomys ordii ENSDORG00000010064 I 0.804
BCL11A Erinaceus europaeus ENSEEUG00000010958 I 0.804
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I 0.804
BCL11A Felis catus ENSFCAG00000027154 I 0.804
BCL11A Homo sapiens ENSG00000119866 D 0.804
BCL11B Homo sapiens ENSG00000127152 D 0.823
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I 0.815
bcl11aa Gasterosteus aculeatus ENSGACG00000013419 I 0.804
bcl11ab Gasterosteus aculeatus ENSGACG00000019222 I 0.814
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I 0.804
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I 0.823
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I 0.823
BCL11B Gorilla gorilla ENSGGOG00000001232 I 0.823
BCL11A Gorilla gorilla ENSGGOG00000007337 I 0.804
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I 0.815
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I 0.816
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I 0.806
BCL11A Loxodonta africana ENSLAFG00000003101 I 0.804
BCL11B Loxodonta africana ENSLAFG00000009254 I 0.823
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I 0.813
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I 0.814
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I 0.804
BCL11A Meleagris gallopavo ENSMGAG00000013042 I 0.804
BCL11A Microcebus murinus ENSMICG00000015052 I 0.804
BCL11B Macaca mulatta ENSMMUG00000003261 I 0.823
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I 0.804
BCL11B Monodelphis domestica ENSMODG00000012964 I 0.823
Bcl11a Mus musculus ENSMUSG00000000861 I 0.804
Bcl11b Mus musculus ENSMUSG00000048251 I 0.823
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I 0.823
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I 0.806
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I 0.823
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I 0.804
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I 0.807
BCL11B Otolemur garnettii ENSOGAG00000033204 I 0.823
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I 0.825
ENSONIG00000002906 Oreochromis niloticus ENSONIG00000002906 I 0.799
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I 0.813
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I 0.811
bcl11aa Oryzias latipes ENSORLG00000001704 I 0.799
im:7142702 Oryzias latipes ENSORLG00000010488 I 0.825
bcl11ba Oryzias latipes ENSORLG00000010826 I 0.813
bcl11ab Oryzias latipes ENSORLG00000013169 I 0.811
ENSP00000338774 Macaca fascicularis ENSP00000338774 I 0.804
ENSP00000349723 Macaca fascicularis ENSP00000349723 I 0.819
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I 0.823
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I 0.827
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I 0.815
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I 0.811
ENSPFOG00000019062 Poecilia formosa ENSPFOG00000019062 I 0.799
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I 0.823
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I 0.823
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I 0.804
BCL11B Pan troglodytes ENSPTRG00000006707 I 0.823
BCL11A Pteropus vampyrus ENSPVAG00000000042 I 0.804
BCL11B Pteropus vampyrus ENSPVAG00000015516 I 0.823
Bcl11b Rattus norvegicus ENSRNOG00000005776 I 0.823
Bcl11a Rattus norvegicus ENSRNOG00000007049 I 0.804
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I 0.823
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I 0.804
BCL11B Sus scrofa ENSSSCG00000002507 I 0.823
BCL11A Sus scrofa ENSSSCG00000008392 I 0.804
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I 0.804
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I 0.823
BCL11A Taeniopygia guttata ENSTGUG00000006790 I 0.804
BCL11B Taeniopygia guttata ENSTGUG00000012711 I 0.823
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I 0.813
im:7142702 Tetraodon nigroviridis ENSTNIG00000009693 I 0.812
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I 0.811
bcl11ba Takifugu rubripes ENSTRUG00000003531 I 0.813
bcl11aa Takifugu rubripes ENSTRUG00000003815 I 0.799
bcl11ab Takifugu rubripes ENSTRUG00000013751 I 0.811
im:7142702 Takifugu rubripes ENSTRUG00000018074 I 0.825
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I 0.804
BCL11A Tursiops truncatus ENSTTRG00000006191 I 0.804
BCL11B Tursiops truncatus ENSTTRG00000012140 I 0.818
BCL11A Vicugna pacos ENSVPAG00000000491 I 0.804
ENSXMAG00000007242 Xiphophorus maculatus ENSXMAG00000007242 I 0.802
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I 0.827
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I 0.815
Gfo_R006733 Geospiza fortis Gfo_R006733 I 0.823
Gfo_R008167 Geospiza fortis Gfo_R008167 I 0.804
HHAL008065-PA Halyomorpha halys HHAL008065-PA I 0.770
ISCW016418 Ixodes scapularis ISCW016418 I 0.790
L798_02171 Zootermopsis nevadensis L798_02171 I 0.771
LotgiG139415 Lottia gigantea LotgiG139415 I 0.775
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I 0.798
PHUM606430 Pediculus humanus PHUM606430 I 0.781
Pvit_09536 Pogona vitticeps Pvit_09536 I 0.823
Pvit_18645 Pogona vitticeps Pvit_18645 I 0.804
RPRC001562 Rhodnius prolixus RPRC001562 I 0.776
Sakowv30026316m.g Saccoglossus kowalevskii Sakowv30026316m.g I 0.816
SMAR003355 Strigamia maritima SMAR003355 I 0.802
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I 0.803
bcl11a Xenopus tropicalis XB-GENE-486641 I 0.804