SNAI1 (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000011934 T105895_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Snai1
M00781_2.00 		Mus musculus
NNNTGTCANN
NNTGACANNN		 PBM
Weirauch et al.(2013)
pTH2340 		0.819 0.912
Snai1
M09002_2.00 		Mus musculus
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_MOUSE.H11MO.0.C 		0.819 0.912
SNAI1
M04441_2.00 		Homo sapiens
NVCACCTGYN
NRCAGGTGBN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_HT-SELEX 		0.816 0.912
SNAI1
M04443_2.00 		Homo sapiens
TRCACCTGYN
NRCAGGTGYA		 SELEX
Yin et al.(2017)
SNAI1_FL_HT-SELEX 		0.816 0.912
SNAI1
M08303_2.00 		Homo sapiens
NNNNGCACCTGCYNB
VNRGCAGGTGCNNNN		 ChIP-seq
Schmitges et al.(2016)
O95863.MEME 		0.816 0.912
SNAI1
M08886_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_HUMAN.H11MO.0.C 		0.816 0.912
SNAI1
M10201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q4 		0.816 0.912
SNAI1
M10202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q6 		0.816 0.912
SNAI1
M04442_2.00 		Homo sapiens
NRCACCTGYN
NRCAGGTGYN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_Methyl-HT-SELEX 		0.816 0.912
SNAI1
M04444_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI1_FL_Methyl-HT-SELEX 		0.816 0.912
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000011091 C2H2 ZF 126 148
ENSPCAP00000011091 C2H2 ZF 152 174
ENSPCAP00000011091 C2H2 ZF 180 202
ENSPCAP00000011091 C2H2 ZF 208 229

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004772 Calypte anna Aan_R004772 I
Aan_R005804 Calypte anna Aan_R005804 I
Aan_R013349 Calypte anna Aan_R013349 I
Afo_R000778 Aptenodytes forsteri Afo_R000778 I
Alligator_sinensis_CCG005717.1 Alligator sinensis Alligator_sinensis_CCG005717.1 I
Alligator_sinensis_CCG012204.1 Alligator sinensis Alligator_sinensis_CCG012204.1 I
Alligator_sinensis_CCG012205.1 Alligator sinensis Alligator_sinensis_CCG012205.1 I
Alligator_sinensis_CCG018453.1 Alligator sinensis Alligator_sinensis_CCG018453.1 I
CapteG160442 Capitella teleta CapteG160442 I
CGI_10016116 Crassostrea gigas CGI_10016116 I
Cmyd_10016552 Chelonia mydas Cmyd_10016552 I
Cmyd_10020767 Chelonia mydas Cmyd_10020767 I
ENSACAG00000003681 Anolis carolinensis ENSACAG00000003681 I
ZIC1 Anolis carolinensis ENSACAG00000006947 I
ENSAMEG00000002144 Ailuropoda melanoleuca ENSAMEG00000002144 I
ENSAMEG00000002149 Ailuropoda melanoleuca ENSAMEG00000002149 I
ENSAMEG00000002684 Ailuropoda melanoleuca ENSAMEG00000002684 I
ENSAMEG00000004500 Ailuropoda melanoleuca ENSAMEG00000004500 I
ENSAMEG00000004503 Ailuropoda melanoleuca ENSAMEG00000004503 I
ENSAMXG00000002320 Astyanax mexicanus ENSAMXG00000002320 I
ENSAMXG00000002323 Astyanax mexicanus ENSAMXG00000002323 I
ENSAMXG00000010931 Astyanax mexicanus ENSAMXG00000010931 I
ENSAMXG00000010941 Astyanax mexicanus ENSAMXG00000010941 I
ENSAMXG00000012325 Astyanax mexicanus ENSAMXG00000012325 I
ENSAPLG00000002960 Anas platyrhynchos ENSAPLG00000002960 I
ENSAPLG00000003027 Anas platyrhynchos ENSAPLG00000003027 I
ENSAPLG00000010556 Anas platyrhynchos ENSAPLG00000010556 I
ZIC4 Bos taurus ENSBTAG00000014749 I
ZIC1 Bos taurus ENSBTAG00000014751 I
ZIC3 Bos taurus ENSBTAG00000021413 I
ZIC2 Bos taurus ENSBTAG00000025246 I
ENSBTAP00000035289-D2 Bos grunniens ENSBTAP00000035289-D2 I
ZIC5 Canis familiaris ENSCAFG00000005834 I
ZIC2 Canis familiaris ENSCAFG00000005835 I
ZIC4 Canis familiaris ENSCAFG00000008194 I
ZIC3 Canis familiaris ENSCAFG00000018979 I
ZIC1 Callithrix jacchus ENSCJAG00000001524 I
ZIC3 Callithrix jacchus ENSCJAG00000013792 I
ENSCJAG00000020987 Callithrix jacchus ENSCJAG00000020987 I
ZIC2 Callithrix jacchus ENSCJAG00000020988 I
ENSCPOG00000002374 Cavia porcellus ENSCPOG00000002374 I
ZIC4 Cavia porcellus ENSCPOG00000010981 I
ZIC2 Cavia porcellus ENSCPOG00000026926 I
ENSCSAG00000007453 Chlorocebus sabaeus ENSCSAG00000007453 I
ENSCSAG00000011405 Chlorocebus sabaeus ENSCSAG00000011405 I
ENSCSAG00000011409 Chlorocebus sabaeus ENSCSAG00000011409 I
ENSCSAG00000017494 Chlorocebus sabaeus ENSCSAG00000017494 I
ENSCSAG00000017495 Chlorocebus sabaeus ENSCSAG00000017495 I
zic2a Danio rerio ENSDARG00000015554 I
zic1 Danio rerio ENSDARG00000015567 I
zic5 Danio rerio ENSDARG00000016022 I
zic4 Danio rerio ENSDARG00000031307 I
zic2b Danio rerio ENSDARG00000037178 I
zic3 Danio rerio ENSDARG00000071497 I
ZIC4 Dasypus novemcinctus ENSDNOG00000001881 I
ZIC3 Dasypus novemcinctus ENSDNOG00000006192 I
ZIC2 Dasypus novemcinctus ENSDNOG00000043170 I
ZIC5 Dasypus novemcinctus ENSDNOG00000046390 I
ZIC1 Dasypus novemcinctus ENSDNOG00000047101 I
ENSDORG00000014318 Dipodomys ordii ENSDORG00000014318 I
ZIC3 Equus caballus ENSECAG00000013318 I
ZIC2 Equus caballus ENSECAG00000018593 I
ZIC4 Equus caballus ENSECAG00000020070 I
ZIC1 Equus caballus ENSECAG00000020355 I
ZIC4 Erinaceus europaeus ENSEEUG00000000251 I
ZIC5 Erinaceus europaeus ENSEEUG00000002965 I
ZIC2 Erinaceus europaeus ENSEEUG00000013747 I
ZIC2 Echinops telfairi ENSETEG00000007329 I
ZIC3 Echinops telfairi ENSETEG00000018846 I
ENSFALG00000003772 Ficedula albicollis ENSFALG00000003772 I
ENSFALG00000004344 Ficedula albicollis ENSFALG00000004344 I
ENSFALG00000007091 Ficedula albicollis ENSFALG00000007091 I
ENSFALG00000007094 Ficedula albicollis ENSFALG00000007094 I
ZIC4 Felis catus ENSFCAG00000007059 I
ZIC1 Felis catus ENSFCAG00000007061 I
ZIC3 Felis catus ENSFCAG00000025684 I
ENSFCAG00000030117 Felis catus ENSFCAG00000030117 I
ZIC2 Homo sapiens ENSG00000043355 D
ZIC5 Homo sapiens ENSG00000139800 D
ZIC1 Homo sapiens ENSG00000152977 D
ZIC3 Homo sapiens ENSG00000156925 D
ZIC4 Homo sapiens ENSG00000174963 D
zic2b Gasterosteus aculeatus ENSGACG00000001901 I
zic1 Gasterosteus aculeatus ENSGACG00000003678 I
zic4 Gasterosteus aculeatus ENSGACG00000003685 I
zic3 Gasterosteus aculeatus ENSGACG00000017212 I
ENSGALG00000006497 Gallus gallus ENSGALG00000006497 I
ENSGALG00000006810 Gallus gallus ENSGALG00000006810 I
ENSGALG00000006811 Gallus gallus ENSGALG00000006811 I
ZIC1 Gorilla gorilla ENSGGOG00000001101 I
ZIC2 Gorilla gorilla ENSGGOG00000006512 I
ZIC4 Gorilla gorilla ENSGGOG00000008924 I
ZIC3 Gorilla gorilla ENSGGOG00000011914 I
ZIC5 Gorilla gorilla ENSGGOG00000022385 I
ENSGMOG00000001788 Gadus morhua ENSGMOG00000001788 I
ENSGMOG00000001798 Gadus morhua ENSGMOG00000001798 I
ENSGMOG00000004438 Gadus morhua ENSGMOG00000004438 I
ENSGMOG00000019585 Gadus morhua ENSGMOG00000019585 I
ENSLACG00000008525 Latimeria chalumnae ENSLACG00000008525 I
ENSLACG00000014597 Latimeria chalumnae ENSLACG00000014597 I
ZIC3 Loxodonta africana ENSLAFG00000007048 I
ZIC2 Loxodonta africana ENSLAFG00000008431 I
ZIC1 Loxodonta africana ENSLAFG00000030632 I
ENSLOCG00000003077 Lepisosteus oculatus ENSLOCG00000003077 I
ENSLOCG00000003087 Lepisosteus oculatus ENSLOCG00000003087 I
ENSLOCG00000007706 Lepisosteus oculatus ENSLOCG00000007706 I
ENSLOCG00000007717 Lepisosteus oculatus ENSLOCG00000007717 I
ENSLOCG00000015155 Lepisosteus oculatus ENSLOCG00000015155 I
ENSMEUG00000004592 Macropus eugenii ENSMEUG00000004592 I
ENSMEUG00000009632 Macropus eugenii ENSMEUG00000009632 I
ENSMEUG00000014290 Macropus eugenii ENSMEUG00000014290 I
ENSMICG00000010339 Microcebus murinus ENSMICG00000010339 I
ZIC4 Microcebus murinus ENSMICG00000014391 I
ZIC1 Microcebus murinus ENSMICG00000014401 I
ZIC2 Microcebus murinus ENSMICG00000015310 I
ZIC2 Myotis lucifugus ENSMLUG00000003412 I
ZIC3 Myotis lucifugus ENSMLUG00000011691 I
ZIC4 Macaca mulatta ENSMMUG00000004741 I
ZIC1 Macaca mulatta ENSMMUG00000004742 I
ZIC5 Macaca mulatta ENSMMUG00000014821 I
ZIC2 Macaca mulatta ENSMMUG00000014822 I
ZIC2 Monodelphis domestica ENSMODG00000007718 I
ZIC5 Monodelphis domestica ENSMODG00000007733 I
ZIC3 Monodelphis domestica ENSMODG00000014029 I
ENSMODG00000021250 Monodelphis domestica ENSMODG00000021250 I
ENSMPUG00000001786 Mustela putorius furo ENSMPUG00000001786 I
ENSMPUG00000011375 Mustela putorius furo ENSMPUG00000011375 I
ENSMPUG00000011764 Mustela putorius furo ENSMPUG00000011764 I
ENSMPUG00000011767 Mustela putorius furo ENSMPUG00000011767 I
Zic1 Mus musculus ENSMUSG00000032368 D
Zic4 Mus musculus ENSMUSG00000036972 I
Zic2 Mus musculus ENSMUSG00000061524 D
Zic3 Mus musculus ENSMUSG00000067860 D
ENSNLEG00000002375 Nomascus leucogenys ENSNLEG00000002375 I
ENSNLEG00000002407 Nomascus leucogenys ENSNLEG00000002407 I
ENSNLEG00000003005 Nomascus leucogenys ENSNLEG00000003005 I
ENSNLEG00000007807 Nomascus leucogenys ENSNLEG00000007807 I
ENSNLEG00000007808 Nomascus leucogenys ENSNLEG00000007808 I
ZIC4 Ornithorhynchus anatinus ENSOANG00000007364 I
ENSOARG00000004385 Ovis aries ENSOARG00000004385 I
ENSOARG00000005434 Ovis aries ENSOARG00000005434 I
ENSOARG00000005467 Ovis aries ENSOARG00000005467 I
ENSOARG00000010774 Ovis aries ENSOARG00000010774 I
ZIC3 Oryctolagus cuniculus ENSOCUG00000009358 I
ZIC4 Oryctolagus cuniculus ENSOCUG00000010959 I
ZIC4 Otolemur garnettii ENSOGAG00000007463 I
ZIC1 Otolemur garnettii ENSOGAG00000007465 I
ZIC3 Otolemur garnettii ENSOGAG00000011700 I
ZIC2 Otolemur garnettii ENSOGAG00000025901 I
ENSONIG00000002716 Oreochromis niloticus ENSONIG00000002716 I
ENSONIG00000005875 Oreochromis niloticus ENSONIG00000005875 I
ENSONIG00000005878 Oreochromis niloticus ENSONIG00000005878 I
ENSONIG00000006787 Oreochromis niloticus ENSONIG00000006787 I
ENSONIG00000006788 Oreochromis niloticus ENSONIG00000006788 I
zic3 Oryzias latipes ENSORLG00000001654 I
zic1 Oryzias latipes ENSORLG00000010050 I
zic4 Oryzias latipes ENSORLG00000010055 I
zic2b Oryzias latipes ENSORLG00000011117 I
zic5 Oryzias latipes ENSORLG00000011124 I
ENSP00000282928 Macaca fascicularis ENSP00000282928 I
ENSP00000282928-D1 Bos grunniens ENSP00000282928-D1 I
ENSP00000287538 Macaca fascicularis ENSP00000287538 I
ENSP00000287538-D1 Bos grunniens ENSP00000287538-D1 I
ENSP00000397695 Macaca fascicularis ENSP00000397695 I
ENSP00000397695-D1 Bos grunniens ENSP00000397695-D1 I
ENSPANG00000005804 Papio anubis ENSPANG00000005804 I
ENSPANG00000007601 Papio anubis ENSPANG00000007601 I
ENSPANG00000011357 Papio anubis ENSPANG00000011357 I
ENSPANG00000018055 Papio anubis ENSPANG00000018055 I
ENSPANG00000024745 Papio anubis ENSPANG00000024745 I
ZIC4 Procavia capensis ENSPCAG00000008210 I
ZIC5 Procavia capensis ENSPCAG00000011845 I
ENSPFOG00000012158 Poecilia formosa ENSPFOG00000012158 I
ENSPFOG00000012173 Poecilia formosa ENSPFOG00000012173 I
ENSPFOG00000012982 Poecilia formosa ENSPFOG00000012982 I
ENSPFOG00000013981 Poecilia formosa ENSPFOG00000013981 I
ENSPFOG00000014007 Poecilia formosa ENSPFOG00000014007 I
ENSPPYG00000005472 Pongo abelii ENSPPYG00000005472 I
ENSPPYG00000014188 Pongo abelii ENSPPYG00000014188 I
ENSPPYG00000020775 Pongo abelii ENSPPYG00000020775 I
ENSPSIG00000004881 Pelodiscus sinensis ENSPSIG00000004881 I
ENSPSIG00000005002 Pelodiscus sinensis ENSPSIG00000005002 I
ENSPSIG00000009089 Pelodiscus sinensis ENSPSIG00000009089 I
ENSPSIG00000009132 Pelodiscus sinensis ENSPSIG00000009132 I
ENSPSIG00000011896 Pelodiscus sinensis ENSPSIG00000011896 I
ZIC2 Pan troglodytes ENSPTRG00000006000 I
ZIC4 Pan troglodytes ENSPTRG00000015500 I
ZIC1 Pan troglodytes ENSPTRG00000015501 I
ENSPTRG00000034285 Pan troglodytes ENSPTRG00000034285 I
ZIC4 Pteropus vampyrus ENSPVAG00000003870 I
ZIC3 Pteropus vampyrus ENSPVAG00000011652 I
Zic3 Rattus norvegicus ENSRNOG00000000861 I
Zic5 Rattus norvegicus ENSRNOG00000014358 I
Zic1 Rattus norvegicus ENSRNOG00000014644 I
Zic4 Rattus norvegicus ENSRNOG00000014871 I
Zic2 Rattus norvegicus ENSRNOG00000054879 I
ZIC3 Sorex araneus ENSSARG00000012492 I
ENSSHAG00000003850 Sarcophilus harrisii ENSSHAG00000003850 I
ENSSHAG00000015091 Sarcophilus harrisii ENSSHAG00000015091 I
ZIC2 Sus scrofa ENSSSCG00000009520 I
ZIC1 Sus scrofa ENSSSCG00000011692 I
ZIC4 Sus scrofa ENSSSCG00000011693 I
ZIC3 Sus scrofa ENSSSCG00000012705 I
ENSSTOG00000000952 Ictidomys tridecemlineatus ENSSTOG00000000952 I
ENSSTOG00000015977 Ictidomys tridecemlineatus ENSSTOG00000015977 I
ENSSTOG00000023178 Ictidomys tridecemlineatus ENSSTOG00000023178 I
ENSSTOG00000024153 Ictidomys tridecemlineatus ENSSTOG00000024153 I
ENSSTOG00000027399 Ictidomys tridecemlineatus ENSSTOG00000027399 I
ZIC3 Taeniopygia guttata ENSTGUG00000002155 I
ENSTGUG00000008837 Taeniopygia guttata ENSTGUG00000008837 I
ZIC1 Taeniopygia guttata ENSTGUG00000008838 I
zic1 Tetraodon nigroviridis ENSTNIG00000012758 I
zic4 Tetraodon nigroviridis ENSTNIG00000012759 I
zic2b Tetraodon nigroviridis ENSTNIG00000014979 I
zic5 Tetraodon nigroviridis ENSTNIG00000014980 I
zic3 Tetraodon nigroviridis ENSTNIG00000016841 I
zic3 Takifugu rubripes ENSTRUG00000003550 I
zic5 Takifugu rubripes ENSTRUG00000011797 I
zic1 Takifugu rubripes ENSTRUG00000017760 I
zic4 Takifugu rubripes ENSTRUG00000017765 I
ENSTSYG00000003356 Tarsius syrichta ENSTSYG00000003356 I
ZIC2 Tursiops truncatus ENSTTRG00000002568 I
ZIC4 Tursiops truncatus ENSTTRG00000014343 I
ZIC1 Tursiops truncatus ENSTTRG00000014350 I
ENSXMAG00000009162 Xiphophorus maculatus ENSXMAG00000009162 I
ENSXMAG00000009164 Xiphophorus maculatus ENSXMAG00000009164 I
ENSXMAG00000010995 Xiphophorus maculatus ENSXMAG00000010995 I
ENSXMAG00000010996 Xiphophorus maculatus ENSXMAG00000010996 I
ENSXMAG00000013404 Xiphophorus maculatus ENSXMAG00000013404 I
estExt_gwp.C_400285 Branchiostoma floridae estExt_gwp.C_400285 I
Gfo_R005436 Geospiza fortis Gfo_R005436 I
Gfo_R015355 Geospiza fortis Gfo_R015355 I
L798_08424 Zootermopsis nevadensis L798_08424 I
LotgiG193238 Lottia gigantea LotgiG193238 I
Myotis_brandtii_PCCA_10007322 Myotis brandtii Myotis_brandtii_PCCA_10007322 I
Myotis_brandtii_ZIC1_10009541 Myotis brandtii Myotis_brandtii_ZIC1_10009541 I
Myotis_brandtii_ZIC3_10005513 Myotis brandtii Myotis_brandtii_ZIC3_10005513 I
Myotis_brandtii_Zic4_10009542 Myotis brandtii Myotis_brandtii_Zic4_10009542 I
Ogr05309 Ophisaurus gracilis Ogr05309 I
Ogr15027 Ophisaurus gracilis Ogr15027 I
Ogr15030 Ophisaurus gracilis Ogr15030 I
Ogr17255 Ophisaurus gracilis Ogr17255 I
PHUM303860 Pediculus humanus PHUM303860 I
Pvit_01478 Pogona vitticeps Pvit_01478 I
Pvit_01479 Pogona vitticeps Pvit_01479 I
Pvit_14046 Pogona vitticeps Pvit_14046 I
Pvit_14047 Pogona vitticeps Pvit_14047 I
SMAR005380 Strigamia maritima SMAR005380 I
SPU_028583 Strongylocentrotus purpuratus SPU_028583 I
SPU_030070 Strongylocentrotus purpuratus SPU_030070 I
zic4 Xenopus tropicalis XB-GENE-1033015 I
zic4.L Xenopus laevis XB-GENE-1033019 I
zic3 Xenopus tropicalis XB-GENE-480431 I
zic5 Xenopus tropicalis XB-GENE-480775 I
zic2.L Xenopus laevis XB-GENE-482658 I
zic2.S Xenopus laevis XB-GENE-6251643 I
zic1.S Xenopus laevis XB-GENE-864815 I
zic3.S Xenopus laevis XB-GENE-865376 I
zic5.S Xenopus laevis XB-GENE-865408 I
XP_002937379 Xenopus tropicalis XP_002937379 I