Trerf1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000022598 T109102_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000032697 C2H2 ZF 518 540
ENSRNOP00000032697 C2H2 ZF 935 959
ENSRNOP00000032697 C2H2 ZF 1008 1030
ENSRNOP00000072249 C2H2 ZF 518 540
ENSRNOP00000072249 C2H2 ZF 1044 1068
ENSRNOP00000072249 C2H2 ZF 1117 1139

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30136.m001048 Ricinus communis 30136.m001048 N 0.000
Aquca_022_00282 Aquilegia coerulea Aquca_022_00282 I 0.000
NAC082 Arabidopsis thaliana AT5G09330 N 0.000
anac103 Arabidopsis thaliana AT5G64060 D 0.000
Bo3g101690 Brassica oleracea Bo3g101690 I 0.000
Bra024263 Brassica rapa Bra024263 I 0.000
Ciclev10001200m.g Citrus clementina Ciclev10001200m.g N 0.000
VNI1 Arabidopsis lyrata fgenesh2_kg.6__879__AT5G09330.2 N 0.000
GSMUA_Achr11G09000_001 Musa acuminata GSMUA_Achr11G09000_001 N 0.000
Lus10020896.g Linum usitatissimum Lus10020896.g N 0.000
mgf025137m Mimulus guttatus mgf025137m N 0.000
orange1.1g036240m.g Citrus sinensis orange1.1g036240m.g N 0.000
PDK_20s1369501g001 Phoenix dactylifera PDK_20s1369501g001 N 0.000
Solyc11g005920.1 Solanum lycopersicum Solyc11g005920.1 N 0.000
TCM_028313 Theobroma cacao TCM_028313 N 0.000
Thhalv10004501m.g Eutrema salsugineum Thhalv10004501m.g I 0.000
Thhalv10013785m.g Eutrema salsugineum Thhalv10013785m.g N 0.000