CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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G647_00459
(
Cladophialophora carrionii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
G647_00459
T117771_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_00900
M01178_2.00
Histoplasma capsulatum
VWTCCYNNNN
NNNNRGGAWB
PBM
Lambert et al.(2019)
pTH11146
0.784
0.857
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETI28010
C2H2 ZF
134
157
QCWDHGCNGRQFSTFSNLLRHQRE
ETI28010
C2H2 ZF
166
186
ICPHCGTEFTRTTARNGHMSG
Links
Other
C2H2 ZF
family TFs
Other
Cladophialophora carrionii
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G50680
Arabidopsis thaliana
AT1G50680
I
0.000
AT1G51120
Arabidopsis thaliana
AT1G51120
D
0.000
Bo6g022280
Brassica oleracea
Bo6g022280
I
0.000
Bo6g024770
Brassica oleracea
Bo6g024770
I
0.000
Bostr.26675s0076
Boechera stricta
Bostr.26675s0076
I
0.000
Bostr.26675s0109
Boechera stricta
Bostr.26675s0109
I
0.000
Bra018854
Brassica rapa
Bra018854
I
0.000
Cagra.2093s0004
Capsella grandiflora
Cagra.2093s0004
I
0.000
Carubv10011257m.g
Capsella rubella
Carubv10011257m.g
I
0.000
Carubv10011592m.g
Capsella rubella
Carubv10011592m.g
I
0.000
Cla004867
Citrullus lanatus
Cla004867
I
0.000
Cucsa.142990
Cucumis sativus
Cucsa.142990
I
0.000
fgenesh2_kg.1__4154__AT1G50680.1
Arabidopsis lyrata
fgenesh2_kg.1__4154__AT1G50680.1
I
0.000
fgenesh2_kg.1__4181__AT1G51120.1
Arabidopsis lyrata
fgenesh2_kg.1__4181__AT1G51120.1
I
0.000
Thhalv10012152m.g
Eutrema salsugineum
Thhalv10012152m.g
I
0.000
Thhalv10012356m.g
Eutrema salsugineum
Thhalv10012356m.g
I
0.000