HETIRDRAFT_248323 (Heterobasidion irregulare)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 HETIRDRAFT_248323 T119385_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCHCODRAFT_110420
M01458_2.00 		Schizophyllum commune
VCGCCACNNN
NNNGTGGCGB		 PBM
Najafabadi et al.(2015a)
pTH10238 		0.802 0.907
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETW80832 C2H2 ZF 4 26
ETW80832 C2H2 ZF 32 52

Links

Other C2H2 ZF family TFs
Other Heterobasidion irregulare TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCL18 Arabidopsis thaliana AT1G55580 N
Bo6g034670 Brassica oleracea Bo6g034670 N
Bostr.6758s0017 Boechera stricta Bostr.6758s0017 N
Bra038002 Brassica rapa Bra038002 N
Cagra.0001s0019 Capsella grandiflora Cagra.0001s0019 N
Carubv10011270m.g Capsella rubella Carubv10011270m.g N
LAS Arabidopsis lyrata scaffold_105352.1 N