Traes_5DL_DD8A0F6BE (Triticum aestivum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Traes_5DL_DD8A0F6BE T130627_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZFP5
M01851_2.00
Arabidopsis thaliana
DSWTNNNN

NNNNAWSH
PBM
Weirauch et al.(2014)
pTH7539
0.764 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_5DL_DD8A0F6BE.1 C2H2 ZF 35 57

Links

Other C2H2 ZF family TFs
Other Triticum aestivum TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I
BGIOSGA018253 Oryza indica BGIOSGA018253 I
Bo9g177130 Brassica oleracea Bo9g177130 I
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I
F775_32062 Aegilops tauschii F775_32062 I
GLYMA06G45680 Glycine max GLYMA06G45680 I
GLYMA12G11150 Glycine max GLYMA12G11150 I
GLYMA12G32400 Glycine max GLYMA12G32400 I
GLYMA13G38030 Glycine max GLYMA13G38030 I
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I
LPERR05G09930 Leersia perrieri LPERR05G09930 I
MLOC_77405 Hordeum vulgare MLOC_77405 I
OB05G20700 Oryza brachyantha OB05G20700 I
OBART05G12580 Oryza barthii OBART05G12580 I
OGLUM05G13290 Oryza glumaepatula OGLUM05G13290 I
OLONG_017780 Oryza longistaminata OLONG_017780 I
ONIVA05G13030 Oryza nivara ONIVA05G13030 I
OPUNC05G10700 Oryza punctata OPUNC05G10700 I
ORGLA05G0107600 Oryza glaberrima ORGLA05G0107600 I
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I
PK07402.1 Cannabis sativa PK07402.1 D
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I
Q84JE9_HORVU Hordeum vulgare Q84JE9_HORVU D
Q84ND8_HORVU Hordeum vulgare Q84ND8_HORVU D
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I
TRIUR3_17409 Triticum urartu TRIUR3_17409 I