CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Traes_5DL_DD8A0F6BE
(
Triticum aestivum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Traes_5DL_DD8A0F6BE
T130627_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP5
M01851_2.00
Arabidopsis thaliana
DSWTNNNN
NNNNAWSH
PBM
Weirauch et al.(2014)
pTH7539
0.764
0.652
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5DL_DD8A0F6BE.1
C2H2 ZF
35
57
FLCVYCDRKFRSSQALGGHQNAH
Links
Other
C2H2 ZF
family TFs
Other
Triticum aestivum
TFs
95 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00023p00044590
Amborella trichopoda
AMTR_s00023p00044590
I
BGIOSGA018253
Oryza indica
BGIOSGA018253
I
Bo9g177130
Brassica oleracea
Bo9g177130
I
BRADI2G29960
Brachypodium distachyon
BRADI2G29960
I
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
F775_32062
Aegilops tauschii
F775_32062
I
GLYMA06G45680
Glycine max
GLYMA06G45680
I
GLYMA12G11150
Glycine max
GLYMA12G11150
I
GLYMA12G32400
Glycine max
GLYMA12G32400
I
GLYMA13G38030
Glycine max
GLYMA13G38030
I
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
LPERR05G09930
Leersia perrieri
LPERR05G09930
I
MLOC_77405
Hordeum vulgare
MLOC_77405
I
OB05G20700
Oryza brachyantha
OB05G20700
I
OBART05G12580
Oryza barthii
OBART05G12580
I
OGLUM05G13290
Oryza glumaepatula
OGLUM05G13290
I
OLONG_017780
Oryza longistaminata
OLONG_017780
I
ONIVA05G13030
Oryza nivara
ONIVA05G13030
I
OPUNC05G10700
Oryza punctata
OPUNC05G10700
I
ORGLA05G0107600
Oryza glaberrima
ORGLA05G0107600
I
ORUFI05G13560
Oryza rufipogon
ORUFI05G13560
I
PK07402.1
Cannabis sativa
PK07402.1
D
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
Q84JE9_HORVU
Hordeum vulgare
Q84JE9_HORVU
D
Q84ND8_HORVU
Hordeum vulgare
Q84ND8_HORVU
D
SapurV1A.0133s0330
Salix purpurea
SapurV1A.0133s0330
I
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
Traes_1AL_A9FB6BF52
Triticum aestivum
Traes_1AL_A9FB6BF52
I
Traes_1BL_BDF0801D01
Triticum aestivum
Traes_1BL_BDF0801D01
I
TRIUR3_17409
Triticum urartu
TRIUR3_17409
I