Ogr09580 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr09580 T136644_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF217
M10260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZABC1_01 		0.767 0.882
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr09580 C2H2 ZF 58 81
Ogr09580 C2H2 ZF 123 145
Ogr09580 C2H2 ZF 151 173
Ogr09580 C2H2 ZF 211 232
Ogr09580 C2H2 ZF 487 508
Ogr09580 C2H2 ZF 514 537

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28629.m000575 Ricinus communis 28629.m000575 N 0.000
30032.m000479 Ricinus communis 30032.m000479 N 0.000
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.000
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N 0.000
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.000
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.000
cassava19207.valid.m1 Manihot esculenta cassava19207.valid.m1 N 0.000
Ciclev10012468m.g Citrus clementina Ciclev10012468m.g N 0.000
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.000
Cla018691 Citrullus lanatus Cla018691 N 0.000
Cla018692 Citrullus lanatus Cla018692 N 0.000
Cucsa.083530 Cucumis sativus Cucsa.083530 N 0.000
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.000
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N 0.000
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.000
gene15644-v1.0-hybrid Fragaria vesca gene15644-v1.0-hybrid N 0.000
GLYMA03G35570 Glycine max GLYMA03G35570 N 0.000
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.000
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.000
Gorai.009G399900 Gossypium raimondii Gorai.009G399900 N 0.000
MDP0000130797 Malus domestica MDP0000130797 N 0.000
MDP0000252435 Malus domestica MDP0000252435 N 0.000
MDP0000506233 Malus domestica MDP0000506233 N 0.000
MDP0000759504 Malus domestica MDP0000759504 N 0.000
mgf020234m Mimulus guttatus mgf020234m N 0.000
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.000
orange1.1g039532m.g Citrus sinensis orange1.1g039532m.g N 0.000
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N 0.000
PK27925.1 Cannabis sativa PK27925.1 N 0.000
PK29014.1 Cannabis sativa PK29014.1 N 0.000
Pm001403 Prunus mume Pm001403 N 0.000
POPTR_0006s22580 Populus trichocarpa POPTR_0006s22580 N 0.000
POPTR_0016s07680 Populus trichocarpa POPTR_0016s07680 N 0.000
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.000
PRUPE_ppa025103mg Prunus persica PRUPE_ppa025103mg N 0.000
SapurV1A.0768s0010 Salix purpurea SapurV1A.0768s0010 N 0.000
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N 0.000
TCM_022676 Theobroma cacao TCM_022676 N 0.000
TCM_022690 Theobroma cacao TCM_022690 N 0.000
VIT_08s0007g02940 Vitis vinifera VIT_08s0007g02940 N 0.000