Pvit_01334 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_01334 T136872_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.780 0.870
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.780 0.870
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.780 0.870
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.780 0.870
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.780 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_01334 C2H2 ZF 21 48
Pvit_01334 C2H2 ZF 54 78
Pvit_01334 C2H2 ZF 84 108
Pvit_01334 C2H2 ZF 114 136

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGAP001291 Anopheles gambiae AGAP001291 I 0.789
ANCCEY_00370 Ancylostoma ceylanicum ANCCEY_00370 I 0.761
CGI_10016115 Crassostrea gigas CGI_10016115 I 0.797
CGI_10016117 Crassostrea gigas CGI_10016117 I 0.780
CJA16978 Caenorhabditis japonica CJA16978 I 0.762
Cmyd_10016551 Chelonia mydas Cmyd_10016551 I 0.783
csin109208 Clonorchis sinensis csin109208 I 0.780
DAPPUDRAFT_290567 Daphnia pulex DAPPUDRAFT_290567 I 0.792
ENSACAG00000003701 Anolis carolinensis ENSACAG00000003701 I 0.780
ENSAMXG00000000658 Astyanax mexicanus ENSAMXG00000000658 I 0.766
ENSAMXG00000012318 Astyanax mexicanus ENSAMXG00000012318 I 0.790
macho1 Ciona intestinalis ENSCING00000007968 I 0.766
ENSCSAVG00000001907 Ciona savignyi ENSCSAVG00000001907 I 0.766
zic6 Danio rerio ENSDARG00000071496 I 0.790
ENSDORG00000012706 Dipodomys ordii ENSDORG00000012706 I 0.783
ENSGMOG00000004419 Gadus morhua ENSGMOG00000004419 I 0.792
ENSMMUP00000019456 Macaca fascicularis ENSMMUP00000019456 I 0.783
ZIC1 Monodelphis domestica ENSMODG00000021251 I 0.807
ENSOANG00000012152 Ornithorhynchus anatinus ENSOANG00000012152 I 0.780
ZIC5 Oryctolagus cuniculus ENSOCUG00000026498 I 0.783
ENSONIG00000002719 Oreochromis niloticus ENSONIG00000002719 I 0.790
ZIC5 Ochotona princeps ENSOPRG00000007526 I 0.783
ENSPFOG00000012980 Poecilia formosa ENSPFOG00000012980 I 0.802
ENSPPYG00000005471 Pongo abelii ENSPPYG00000005471 I 0.783
ENSSHAG00000015025 Sarcophilus harrisii ENSSHAG00000015025 I 0.795
ZIC5 Sus scrofa ENSSSCG00000009521 I 0.783
opa Drosophila melanogaster FBgn0003002 D 0.780
GA10924 Drosophila pseudoobscura FBgn0070980 I 0.780
GF18915 Drosophila ananassae FBgn0095929 I 0.780
GG12590 Drosophila erecta FBgn0104878 I 0.780
GH23039 Drosophila grimshawi FBgn0130496 I 0.780
GI10245 Drosophila mojavensis FBgn0133010 I 0.780
GL21621 Drosophila persimilis FBgn0159214 I 0.780
GM10780 Drosophila sechellia FBgn0165726 I 0.780
GD19752 Drosophila simulans FBgn0191241 I 0.780
GJ11051 Drosophila virilis FBgn0198317 I 0.780
GK13239 Drosophila willistoni FBgn0215248 I 0.780
GB54250 Apis mellifera GB54250 I 0.789
HelroG77001 Helobdella robusta HelroG77001 N 0.758
KGM_22387 Danaus plexippus KGM_22387 I 0.792
MDOA000052 Musca domestica MDOA000052 I 0.794
NEMVEDRAFT_v1g121215 Nematostella vectensis NEMVEDRAFT_v1g121215 I 0.773
NEMVEDRAFT_v1g25267 Nematostella vectensis NEMVEDRAFT_v1g25267 I 0.792
nLs.2.1.2.g02824 Litomosoides sigmodontis nLs.2.1.2.g02824 I 0.773
nRc.2.0.1.g22468 Romanomermis culicivorax nRc.2.0.1.g22468 I 0.795
NV11451 Nasonia vitripennis NV11451 I 0.789
Ogr17257 Ophisaurus gracilis Ogr17257 I 0.780
Sakowv30026420m.g Saccoglossus kowalevskii Sakowv30026420m.g I 0.797
SMU15031708 Schmidtea mediterranea SMU15031708 I 0.778
SMU15033928 Schmidtea mediterranea SMU15033928 I 0.770
SNAPOd2T00002718001 Oikopleura dioica SNAPOd2T00002718001 I 0.777
SPAL_0001746600 Strongyloides papillosus SPAL_0001746600 I 0.777
SSTP_0000201100 Strongyloides stercoralis SSTP_0000201100 I 0.777
SVE_0347600 Strongyloides venezuelensis SVE_0347600 I 0.777
T265_00048 Opisthorchis viverrini T265_00048 I 0.780
TC010234 Tribolium castaneum TC010234 I 0.792
TCLT_0000586501 Thelazia callipaeda TCLT_0000586501 I 0.785
tetur11g00650 Tetranychus urticae tetur11g00650 I 0.783
TMUE_s0101002100 Trichuris muris TMUE_s0101002100 I 0.772
WBGene00239980 Onchocerca volvulus WBGene00239980 I 0.785
XP_002153782.1 Hydra magnipapillata XP_002153782.1 I 0.797
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I 0.780