Sakowv30026420m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30026420m.g T142363_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.795 0.924
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.795 0.924
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.795 0.924
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.795 0.924
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.795 0.924
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23948138_peptide C2H2 ZF 326 353
23948138_peptide C2H2 ZF 359 383
23948138_peptide C2H2 ZF 389 413
23948138_peptide C2H2 ZF 419 443

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGAP001291 Anopheles gambiae AGAP001291 I 0.804
ANCCEY_00370 Ancylostoma ceylanicum ANCCEY_00370 I 0.764
CGI_10016115 Crassostrea gigas CGI_10016115 I 0.812
CGI_10016117 Crassostrea gigas CGI_10016117 I 0.792
Cmyd_10016551 Chelonia mydas Cmyd_10016551 I 0.786
csin109208 Clonorchis sinensis csin109208 I 0.792
DAPPUDRAFT_290567 Daphnia pulex DAPPUDRAFT_290567 I 0.807
ENSACAG00000003701 Anolis carolinensis ENSACAG00000003701 I 0.783
ENSAMXG00000000658 Astyanax mexicanus ENSAMXG00000000658 I 0.766
ENSAMXG00000012318 Astyanax mexicanus ENSAMXG00000012318 I 0.796
ENSCING00000000010 Ciona intestinalis ENSCING00000000010 N 0.763
ENSCING00000000012 Ciona intestinalis ENSCING00000000012 N 0.763
ENSCING00000002517 Ciona intestinalis ENSCING00000002517 N 0.763
macho1 Ciona intestinalis ENSCING00000007968 I 0.766
ENSCING00000021681 Ciona intestinalis ENSCING00000021681 N 0.763
ENSCSAVG00000001907 Ciona savignyi ENSCSAVG00000001907 I 0.766
ENSCSAVG00000002442 Ciona savignyi ENSCSAVG00000002442 N 0.763
ENSCSAVG00000002450 Ciona savignyi ENSCSAVG00000002450 N 0.763
ENSCSAVG00000002454 Ciona savignyi ENSCSAVG00000002454 N 0.763
ENSCSAVG00000002459 Ciona savignyi ENSCSAVG00000002459 N 0.763
ENSCSAVG00000002465 Ciona savignyi ENSCSAVG00000002465 N 0.763
zic6 Danio rerio ENSDARG00000071496 I 0.796
ENSDORG00000012706 Dipodomys ordii ENSDORG00000012706 I 0.783
ENSGMOG00000004419 Gadus morhua ENSGMOG00000004419 I 0.798
ENSMMUP00000019456 Macaca fascicularis ENSMMUP00000019456 I 0.783
ZIC1 Monodelphis domestica ENSMODG00000021251 I 0.795
ENSOANG00000012152 Ornithorhynchus anatinus ENSOANG00000012152 I 0.783
ZIC5 Oryctolagus cuniculus ENSOCUG00000026498 I 0.783
ENSONIG00000002719 Oreochromis niloticus ENSONIG00000002719 I 0.796
ZIC5 Ochotona princeps ENSOPRG00000007526 I 0.783
ENSPFOG00000012980 Poecilia formosa ENSPFOG00000012980 I 0.796
ENSPPYG00000005471 Pongo abelii ENSPPYG00000005471 I 0.783
ENSSHAG00000015025 Sarcophilus harrisii ENSSHAG00000015025 I 0.795
ZIC5 Sus scrofa ENSSSCG00000009521 I 0.783
opa Drosophila melanogaster FBgn0003002 D 0.795
GA10924 Drosophila pseudoobscura FBgn0070980 I 0.795
GF18915 Drosophila ananassae FBgn0095929 I 0.795
GG12590 Drosophila erecta FBgn0104878 I 0.795
GH23039 Drosophila grimshawi FBgn0130496 I 0.795
GI10245 Drosophila mojavensis FBgn0133010 I 0.795
GL21621 Drosophila persimilis FBgn0159214 I 0.795
GM10780 Drosophila sechellia FBgn0165726 I 0.795
GD19752 Drosophila simulans FBgn0191241 I 0.795
GJ11051 Drosophila virilis FBgn0198317 I 0.795
GK13239 Drosophila willistoni FBgn0215248 I 0.795
GB54250 Apis mellifera GB54250 I 0.804
HDID_0001034301 Hymenolepis diminuta HDID_0001034301 N 0.764
HelroG77001 Helobdella robusta HelroG77001 N 0.770
KGM_22387 Danaus plexippus KGM_22387 I 0.807
MDOA000052 Musca domestica MDOA000052 I 0.797
NEMVEDRAFT_v1g121215 Nematostella vectensis NEMVEDRAFT_v1g121215 I 0.761
NEMVEDRAFT_v1g25267 Nematostella vectensis NEMVEDRAFT_v1g25267 I 0.783
nLs.2.1.2.g02824 Litomosoides sigmodontis nLs.2.1.2.g02824 I 0.773
nRc.2.0.1.g22468 Romanomermis culicivorax nRc.2.0.1.g22468 I 0.807
NV11451 Nasonia vitripennis NV11451 I 0.804
Ogr17257 Ophisaurus gracilis Ogr17257 I 0.783
Pvit_01334 Pogona vitticeps Pvit_01334 I 0.797
SMU15031708 Schmidtea mediterranea SMU15031708 I 0.790
SMU15033928 Schmidtea mediterranea SMU15033928 I 0.788
SNAPOd2T00002718001 Oikopleura dioica SNAPOd2T00002718001 I 0.780
SPAL_0001746600 Strongyloides papillosus SPAL_0001746600 I 0.765
SSTP_0000201100 Strongyloides stercoralis SSTP_0000201100 I 0.765
SVE_0347600 Strongyloides venezuelensis SVE_0347600 I 0.765
T265_00048 Opisthorchis viverrini T265_00048 I 0.792
TC010234 Tribolium castaneum TC010234 I 0.810
TCLT_0000586501 Thelazia callipaeda TCLT_0000586501 I 0.773
tetur11g00650 Tetranychus urticae tetur11g00650 I 0.807
TMUE_s0101002100 Trichuris muris TMUE_s0101002100 I 0.778
WBGene00239980 Onchocerca volvulus WBGene00239980 I 0.773
XP_002153782.1 Hydra magnipapillata XP_002153782.1 I 0.773
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I 0.783