Bostr.15697s0099 (Boechera stricta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Bostr.15697s0099 T142577_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.825 0.935
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.822 0.957
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.822 0.957
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.822 0.957
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.796 0.848
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.788 0.848
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.788 0.848
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.776 0.717
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.776 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.15697s0099.1.p C2H2 ZF 93 115
Bostr.15697s0099.1.p C2H2 ZF 150 172

Links

Other C2H2 ZF family TFs
Other Boechera stricta TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMAM009961 Anopheles maculatus AMAM009961 I 0.000
AMAM021613 Anopheles maculatus AMAM021613 I 0.000
BGIBMGA010300 Bombyx mori BGIBMGA010300 I 0.000
BXY_0883500 Bursaphelenchus xylophilus BXY_0883500 I 0.000
Cflo_05860--XP_394134.2_APIME Camponotus floridanus Cflo_05860--XP_394134.2_APIME I 0.000
Cmyd_10006628 Chelonia mydas Cmyd_10006628 I 0.000
DAPPUDRAFT_9350 Daphnia pulex DAPPUDRAFT_9350 I 0.000
EFV49290 Trichinella spiralis EFV49290 I 0.000
ENSCING00000013609 Ciona intestinalis ENSCING00000013609 I 0.000
POU5F1 Callithrix jacchus ENSCJAG00000019789 I 0.000
ENSCSAVG00000007148 Ciona savignyi ENSCSAVG00000007148 I 0.000
POU2F2 Homo sapiens ENSG00000028277 D 0.000
ENSOANG00000013329 Ornithorhynchus anatinus ENSOANG00000013329 I 0.000
ENSSHAG00000018562 Sarcophilus harrisii ENSSHAG00000018562 I 0.000
acj6 Drosophila melanogaster FBgn0000028 D 0.000
GPUH_0000951201 Gongylonema pulchrum GPUH_0000951201 I 0.000
HelroG138303 Helobdella robusta HelroG138303 I 0.000
L596_g13343 Steinernema carpocapsae L596_g13343 I 0.000
L898_g18190 Steinernema monticolum L898_g18190 I 0.000
MESCA009897 Megaselia scalaris MESCA009897 I 0.000
Ogr05710 Ophisaurus gracilis Ogr05710 I 0.000
PPAI004106 Phlebotomus papatasi PPAI004106 I 0.000
SBAD_0000673901 Soboliphyme baturini SBAD_0000673901 I 0.000