nLs.2.1.2.g04589 (Litomosoides sigmodontis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 nLs.2.1.2.g04589 T155333_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
C55C2.1_CONSTRUCT
M00649_2.00 		PBM CONSTRUCTS
NHYDHHNNN
NNNDDHRDN		 PBM
Narasimhan et al.(2015)
pTH10623 		0.765 0.794
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t04589-RA C2H2 ZF 76 98
nLs.2.1.2.t04589-RA C2H2 ZF 104 126
nLs.2.1.2.t04589-RA C2H2 ZF 132 153

Links

Other C2H2 ZF family TFs
Other Litomosoides sigmodontis TFs

Invalid Input OrderBy

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action