T265_00048 (Opisthorchis viverrini)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 T265_00048 T157495_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.769 0.891
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.769 0.891
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.769 0.891
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.769 0.891
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.769 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
T265_00048 C2H2 ZF 358 385
T265_00048 C2H2 ZF 391 415
T265_00048 C2H2 ZF 421 445
T265_00048 C2H2 ZF 451 475

Links

Other C2H2 ZF family TFs
Other Opisthorchis viverrini TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGAP001291 Anopheles gambiae AGAP001291 I 0.778
ANCCEY_00370 Ancylostoma ceylanicum ANCCEY_00370 I 0.757
CGI_10016115 Crassostrea gigas CGI_10016115 I 0.781
CGI_10016117 Crassostrea gigas CGI_10016117 I 0.788
Cmyd_10016551 Chelonia mydas Cmyd_10016551 I 0.766
csin109208 Clonorchis sinensis csin109208 I 0.827
DAPPUDRAFT_290567 Daphnia pulex DAPPUDRAFT_290567 I 0.776
EmuJ_000768500 Echinococcus multilocularis EmuJ_000768500 N 0.759
ENSACAG00000003701 Anolis carolinensis ENSACAG00000003701 I 0.775
ENSAMXG00000000658 Astyanax mexicanus ENSAMXG00000000658 I 0.770
ENSAMXG00000012318 Astyanax mexicanus ENSAMXG00000012318 I 0.773
ENSCING00000000010 Ciona intestinalis ENSCING00000000010 N 0.768
ENSCING00000000012 Ciona intestinalis ENSCING00000000012 N 0.768
ENSCING00000002517 Ciona intestinalis ENSCING00000002517 N 0.768
macho1 Ciona intestinalis ENSCING00000007968 I 0.761
ENSCING00000021681 Ciona intestinalis ENSCING00000021681 N 0.768
ENSCSAVG00000001907 Ciona savignyi ENSCSAVG00000001907 I 0.761
ENSCSAVG00000002442 Ciona savignyi ENSCSAVG00000002442 N 0.768
ENSCSAVG00000002450 Ciona savignyi ENSCSAVG00000002450 N 0.768
ENSCSAVG00000002454 Ciona savignyi ENSCSAVG00000002454 N 0.768
ENSCSAVG00000002459 Ciona savignyi ENSCSAVG00000002459 N 0.768
ENSCSAVG00000002465 Ciona savignyi ENSCSAVG00000002465 N 0.768
zic6 Danio rerio ENSDARG00000071496 I 0.773
ENSDORG00000012706 Dipodomys ordii ENSDORG00000012706 I 0.766
ENSGMOG00000004419 Gadus morhua ENSGMOG00000004419 I 0.775
ENSMMUP00000019456 Macaca fascicularis ENSMMUP00000019456 I 0.766
ZIC1 Monodelphis domestica ENSMODG00000021251 I 0.775
ENSOANG00000012152 Ornithorhynchus anatinus ENSOANG00000012152 I 0.763
ZIC5 Oryctolagus cuniculus ENSOCUG00000026498 I 0.766
ENSONIG00000002719 Oreochromis niloticus ENSONIG00000002719 I 0.773
ZIC5 Ochotona princeps ENSOPRG00000007526 I 0.766
ENSPFOG00000012980 Poecilia formosa ENSPFOG00000012980 I 0.773
ENSPPYG00000005471 Pongo abelii ENSPPYG00000005471 I 0.766
ENSSHAG00000015025 Sarcophilus harrisii ENSSHAG00000015025 I 0.775
ZIC5 Sus scrofa ENSSSCG00000009521 I 0.766
opa Drosophila melanogaster FBgn0003002 D 0.769
GA10924 Drosophila pseudoobscura FBgn0070980 I 0.769
GF18915 Drosophila ananassae FBgn0095929 I 0.769
GG12590 Drosophila erecta FBgn0104878 I 0.769
GH23039 Drosophila grimshawi FBgn0130496 I 0.769
GI10245 Drosophila mojavensis FBgn0133010 I 0.769
GL21621 Drosophila persimilis FBgn0159214 I 0.769
GM10780 Drosophila sechellia FBgn0165726 I 0.769
GD19752 Drosophila simulans FBgn0191241 I 0.769
GJ11051 Drosophila virilis FBgn0198317 I 0.769
GK13239 Drosophila willistoni FBgn0215248 I 0.769
GB54250 Apis mellifera GB54250 I 0.778
HDID_0001034301 Hymenolepis diminuta HDID_0001034301 N 0.769
HelroG77001 Helobdella robusta HelroG77001 N 0.762
KGM_22387 Danaus plexippus KGM_22387 I 0.781
MDOA000052 Musca domestica MDOA000052 I 0.771
NEMVEDRAFT_v1g121215 Nematostella vectensis NEMVEDRAFT_v1g121215 I 0.757
NEMVEDRAFT_v1g25267 Nematostella vectensis NEMVEDRAFT_v1g25267 I 0.787
nLs.2.1.2.g02824 Litomosoides sigmodontis nLs.2.1.2.g02824 I 0.768
nRc.2.0.1.g22468 Romanomermis culicivorax nRc.2.0.1.g22468 I 0.778
NV11451 Nasonia vitripennis NV11451 I 0.777
Ogr17257 Ophisaurus gracilis Ogr17257 I 0.775
PTRK_0000799900 Parastrongyloides trichosuri PTRK_0000799900 I 0.766
Pvit_01334 Pogona vitticeps Pvit_01334 I 0.780
RSKR_0001155900 Rhabditophanes kr3021 RSKR_0001155900 I 0.766
Sakowv30026420m.g Saccoglossus kowalevskii Sakowv30026420m.g I 0.792
SMU15031708 Schmidtea mediterranea SMU15031708 I 0.795
SMU15033928 Schmidtea mediterranea SMU15033928 I 0.787
SNAPOd2T00002718001 Oikopleura dioica SNAPOd2T00002718001 I 0.760
SPAL_0001746600 Strongyloides papillosus SPAL_0001746600 I 0.766
SSTP_0000201100 Strongyloides stercoralis SSTP_0000201100 I 0.766
SVE_0347600 Strongyloides venezuelensis SVE_0347600 I 0.766
TC010234 Tribolium castaneum TC010234 I 0.781
TCLT_0000586501 Thelazia callipaeda TCLT_0000586501 I 0.768
tetur11g00650 Tetranychus urticae tetur11g00650 I 0.778
TMUE_s0101002100 Trichuris muris TMUE_s0101002100 I 0.760
WBGene00239980 Onchocerca volvulus WBGene00239980 I 0.768
XP_002153782.1 Hydra magnipapillata XP_002153782.1 I 0.769
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I 0.777