L889_g30157 (Steinernema feltiae)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 L889_g30157 T160882_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		0.786 0.786
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		0.786 0.786
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		0.786 0.786
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		0.786 0.786
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		0.786 0.786
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		0.786 0.786
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L889_g30157.t1 CBF/NF-Y 215 270
L889_g30157.t2 CBF/NF-Y 194 249

Links

Other CBF/NF-Y family TFs
Other Steinernema feltiae TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCP8 Arabidopsis thaliana AT1G58100 D
Bo9g052090 Brassica oleracea Bo9g052090 N
BRADI4G35670 Brachypodium distachyon BRADI4G35670 N
Cla007052 Citrullus lanatus Cla007052 N
evm.TU.supercontig_66.26 Carica papaya evm.TU.supercontig_66.26 N
evm.TU.supercontig_70.118 Carica papaya evm.TU.supercontig_70.118 N
GLYMA16G05840 Glycine max GLYMA16G05840 N
ORUFI02G26600 Oryza rufipogon ORUFI02G26600 N
Pavir.Fa00111 Panicum virgatum Pavir.Fa00111 N
PGSC0003DMG400024928 Solanum tuberosum PGSC0003DMG400024928 N
Sb08g004610 Sorghum bicolor Sb08g004610 N
SELMODRAFT_429489 Selaginella moellendorffii SELMODRAFT_429489 N
SELMODRAFT_441321 Selaginella moellendorffii SELMODRAFT_441321 N
Traes_5BL_B94C45A8F Triticum aestivum Traes_5BL_B94C45A8F N