CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb08g004610
(
Sorghum bicolor
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
Sb08g004610
T344355_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb08g004610.1
TCP
91
116
PSEDRHMKVNGRGRRLRMPTLCAARQ
Sb08g004610.1
TCP
115
152
RQAEPAILAATGTGTIPANYSPLDVSIRSGAANPAARA
Links
Other
TCP
family TFs
Other
Sorghum bicolor
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI02G26600
Oryza rufipogon
ORUFI02G26600
N
0.970
Carubv10010909m.g
Capsella rubella
Carubv10010909m.g
N
0.962
TCP8
Arabidopsis thaliana
AT1G58100
D
0.943
GSMUA_Achr10G09730_001
Musa acuminata
GSMUA_Achr10G09730_001
N
0.867
GLYMA16G05840
Glycine max
GLYMA16G05840
N
0.845
evm.TU.supercontig_66.26
Carica papaya
evm.TU.supercontig_66.26
N
0.845
Bo9g052090
Brassica oleracea
Bo9g052090
N
0.842
BRADI4G35670
Brachypodium distachyon
BRADI4G35670
N
0.841
Pavir.Fa00111
Panicum virgatum
Pavir.Fa00111
N
0.841
evm.TU.supercontig_70.118
Carica papaya
evm.TU.supercontig_70.118
N
0.840
GSMUA_Achr6G17840_001
Musa acuminata
GSMUA_Achr6G17840_001
N
0.839
PGSC0003DMG400024928
Solanum tuberosum
PGSC0003DMG400024928
N
0.833
SELMODRAFT_429489
Selaginella moellendorffii
SELMODRAFT_429489
N
0.830
SELMODRAFT_441321
Selaginella moellendorffii
SELMODRAFT_441321
N
0.830
ORUFI02G34160
Oryza rufipogon
ORUFI02G34160
I
0.827