Pavir.Fa00111 (Panicum virgatum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pavir.Fa00111 T344999_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa00111.1.p TCP 61 184
Pavir.Fa00111.1.p TCP 269 354

Links

Other TCP family TFs
Other Panicum virgatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G35670 Brachypodium distachyon BRADI4G35670 N 0.960
evm.TU.supercontig_70.118 Carica papaya evm.TU.supercontig_70.118 N 0.949
SELMODRAFT_429489 Selaginella moellendorffii SELMODRAFT_429489 N 0.944
SELMODRAFT_441321 Selaginella moellendorffii SELMODRAFT_441321 N 0.943
PGSC0003DMG400024928 Solanum tuberosum PGSC0003DMG400024928 N 0.940
GLYMA16G05840 Glycine max GLYMA16G05840 N 0.939
evm.TU.supercontig_66.26 Carica papaya evm.TU.supercontig_66.26 N 0.938
Cla007052 Citrullus lanatus Cla007052 N 0.935
GSMUA_Achr6G17840_001 Musa acuminata GSMUA_Achr6G17840_001 N 0.932
Bo9g052090 Brassica oleracea Bo9g052090 N 0.926
Traes_5BL_B94C45A8F Triticum aestivum Traes_5BL_B94C45A8F N 0.912
TCP8 Arabidopsis thaliana AT1G58100 D 0.896
ORUFI02G26600 Oryza rufipogon ORUFI02G26600 N 0.843
Sb08g004610 Sorghum bicolor Sb08g004610 N 0.841