CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr6G17840_001
(
Musa acuminata
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
GSMUA_Achr6G17840_001
T343976_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr6P17840_001
TCP
1
121
MPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNISLRSSGSSFSAPASKSAPLSFHALALAHHRPDFELHQLLSADQIGEGLQGGVGSGGGDSTDTYLRKR
GSMUA_Achr6P17840_001
TCP
170
277
FWMLPMSAGSAAPAVAAATGTIQAPLQFMSRQPTSGVAAQHLGLGTSETNLGMLAALNAYNRGGGLSMNSEHHHPMDHHHQAHTHQQQQSADSDEDNHTMFFQLVKEY
Links
Other
TCP
family TFs
Other
Musa acuminata
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_5BL_B94C45A8F
Triticum aestivum
Traes_5BL_B94C45A8F
N
0.949
evm.TU.supercontig_70.118
Carica papaya
evm.TU.supercontig_70.118
N
0.932
Pavir.Fa00111
Panicum virgatum
Pavir.Fa00111
N
0.932
PGSC0003DMG400024928
Solanum tuberosum
PGSC0003DMG400024928
N
0.930
evm.TU.supercontig_66.26
Carica papaya
evm.TU.supercontig_66.26
N
0.930
BRADI4G35670
Brachypodium distachyon
BRADI4G35670
N
0.928
SELMODRAFT_441321
Selaginella moellendorffii
SELMODRAFT_441321
N
0.925
SELMODRAFT_429489
Selaginella moellendorffii
SELMODRAFT_429489
N
0.924
Bo9g052090
Brassica oleracea
Bo9g052090
N
0.914
GLYMA16G05840
Glycine max
GLYMA16G05840
N
0.908
Cla007052
Citrullus lanatus
Cla007052
N
0.898
TCP8
Arabidopsis thaliana
AT1G58100
D
0.877
Sb08g004610
Sorghum bicolor
Sb08g004610
N
0.839
ORUFI02G26600
Oryza rufipogon
ORUFI02G26600
N
0.834